Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC23.04■■□□□ 1.28
VPS8Q8N3P4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC23.04■■□□□ 1.28
VPS8Q8N3P4 IGHJ2P-201ENST00000454480 60 ntBASIC23.04■■□□□ 1.28
VPS8Q8N3P4 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC23.04■■□□□ 1.28
VPS8Q8N3P4 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC23.04■■□□□ 1.28
VPS8Q8N3P4 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC23.04■■□□□ 1.28
VPS8Q8N3P4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VPS8Q8N3P4 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
VPS8Q8N3P4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
VPS8Q8N3P4 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 AC005077.2-201ENST00000449786 690 ntBASIC23.03■■□□□ 1.28
VPS8Q8N3P4 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 CHMP4BP1-201ENST00000556017 588 ntBASIC23.03■■□□□ 1.28
VPS8Q8N3P4 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 AL805961.1-203ENST00000641078 1258 ntBASIC23.03■■□□□ 1.28
VPS8Q8N3P4 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
VPS8Q8N3P4 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 AC215219.1-201ENST00000400706 1817 ntBASIC23.02■■□□□ 1.28
VPS8Q8N3P4 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 KRTAP19-9P-201ENST00000421795 191 ntBASIC23.02■■□□□ 1.28
VPS8Q8N3P4 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 RN7SL574P-201ENST00000581512 297 ntBASIC23.02■■□□□ 1.28
VPS8Q8N3P4 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 AC100757.4-201ENST00000626934 759 ntBASIC23.02■■□□□ 1.28
VPS8Q8N3P4 AC138627.1-207ENST00000641560 1006 ntBASIC23.02■■□□□ 1.28
VPS8Q8N3P4 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 RER1-203ENST00000378513 3000 ntTSL 3 BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
VPS8Q8N3P4 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.27
VPS8Q8N3P4 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC23.02■■□□□ 1.27
VPS8Q8N3P4 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC23.02■■□□□ 1.27
VPS8Q8N3P4 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.27
VPS8Q8N3P4 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 ISCA2P1-201ENST00000425548 448 ntBASIC23.01■■□□□ 1.27
VPS8Q8N3P4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 MIR3619-201ENST00000579667 83 ntBASIC23.01■■□□□ 1.27
VPS8Q8N3P4 AP001505.2-201ENST00000616815 443 ntBASIC23.01■■□□□ 1.27
VPS8Q8N3P4 AC092299.1-201ENST00000632679 757 ntBASIC23.01■■□□□ 1.27
VPS8Q8N3P4 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 AC140479.7-201ENST00000636301 2332 ntBASIC23.01■■□□□ 1.27
VPS8Q8N3P4 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 MVK-214ENST00000629016 1591 ntTSL 5 BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
VPS8Q8N3P4 DBET-201ENST00000630918 3363 ntBASIC23.01■■□□□ 1.27
VPS8Q8N3P4 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms