Protein–RNA interactions for Protein: Q8IX21

SLF2, SMC5-SMC6 complex localization factor protein 2, humanhuman

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF2Q8IX21 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC17.77■□□□□ 0.44
SLF2Q8IX21 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF2Q8IX21 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
SLF2Q8IX21 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF2Q8IX21 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
SLF2Q8IX21 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF2Q8IX21 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF2Q8IX21 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC17.77■□□□□ 0.44
SLF2Q8IX21 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC17.77■□□□□ 0.44
SLF2Q8IX21 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF2Q8IX21 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.77■□□□□ 0.44
SLF2Q8IX21 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC17.77■□□□□ 0.44
SLF2Q8IX21 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF2Q8IX21 AL513477.1-201ENST00000602865 2407 ntBASIC17.77■□□□□ 0.44
SLF2Q8IX21 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
SLF2Q8IX21 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
SLF2Q8IX21 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF2Q8IX21 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.77■□□□□ 0.44
SLF2Q8IX21 AL157407.1-201ENST00000435784 904 ntBASIC17.77■□□□□ 0.44
SLF2Q8IX21 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC17.77■□□□□ 0.44
SLF2Q8IX21 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC17.77■□□□□ 0.44
SLF2Q8IX21 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC17.77■□□□□ 0.44
SLF2Q8IX21 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.77■□□□□ 0.44
SLF2Q8IX21 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC17.77■□□□□ 0.44
SLF2Q8IX21 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC17.77■□□□□ 0.44
SLF2Q8IX21 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC17.77■□□□□ 0.44
SLF2Q8IX21 SUPT4H1P2-201ENST00000501248 353 ntBASIC17.77■□□□□ 0.44
SLF2Q8IX21 RNA5SP423-201ENST00000517127 109 ntBASIC17.77■□□□□ 0.44
SLF2Q8IX21 CCNC-217ENST00000523985 958 ntTSL 2 BASIC17.77■□□□□ 0.44
SLF2Q8IX21 AC005962.1-201ENST00000584100 773 ntBASIC17.77■□□□□ 0.44
SLF2Q8IX21 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF2Q8IX21 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC17.77■□□□□ 0.44
SLF2Q8IX21 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.44
SLF2Q8IX21 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
SLF2Q8IX21 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLF2Q8IX21 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLF2Q8IX21 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
SLF2Q8IX21 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
SLF2Q8IX21 AC008132.1-202ENST00000342005 1389 ntBASIC17.77■□□□□ 0.43
SLF2Q8IX21 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.77■□□□□ 0.43
SLF2Q8IX21 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC17.77■□□□□ 0.43
SLF2Q8IX21 PAUPAR-201ENST00000630360 2965 ntBASIC17.76■□□□□ 0.43
SLF2Q8IX21 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF2Q8IX21 MBLAC2-202ENST00000514906 1936 ntBASIC17.76■□□□□ 0.43
SLF2Q8IX21 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF2Q8IX21 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF2Q8IX21 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF2Q8IX21 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF2Q8IX21 MRPL37P1-201ENST00000592451 1337 ntBASIC17.76■□□□□ 0.43
SLF2Q8IX21 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC17.76■□□□□ 0.43
SLF2Q8IX21 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.76■□□□□ 0.43
SLF2Q8IX21 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC17.76■□□□□ 0.43
SLF2Q8IX21 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF2Q8IX21 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF2Q8IX21 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF2Q8IX21 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF2Q8IX21 AC092506.1-202ENST00000401022 528 ntBASIC17.76■□□□□ 0.43
SLF2Q8IX21 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC17.76■□□□□ 0.43
SLF2Q8IX21 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF2Q8IX21 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.76■□□□□ 0.43
SLF2Q8IX21 RCC2P8-201ENST00000502779 1035 ntBASIC17.76■□□□□ 0.43
SLF2Q8IX21 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC17.76■□□□□ 0.43
SLF2Q8IX21 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.76■□□□□ 0.43
SLF2Q8IX21 CHMP4BP1-201ENST00000556017 588 ntBASIC17.76■□□□□ 0.43
SLF2Q8IX21 AL160314.3-201ENST00000556041 767 ntBASIC17.76■□□□□ 0.43
SLF2Q8IX21 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.76■□□□□ 0.43
SLF2Q8IX21 AC015967.2-201ENST00000624092 234 ntBASIC17.76■□□□□ 0.43
SLF2Q8IX21 AC006435.4-201ENST00000625037 234 ntBASIC17.76■□□□□ 0.43
SLF2Q8IX21 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.76■□□□□ 0.43
SLF2Q8IX21 AL356737.1-201ENST00000634391 234 ntBASIC17.76■□□□□ 0.43
SLF2Q8IX21 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF2Q8IX21 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF2Q8IX21 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
SLF2Q8IX21 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.76■□□□□ 0.43
SLF2Q8IX21 AC138035.3-201ENST00000622706 2791 ntBASIC17.76■□□□□ 0.43
SLF2Q8IX21 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF2Q8IX21 FAM90A7P-201ENST00000382628 1395 ntBASIC17.76■□□□□ 0.43
SLF2Q8IX21 FAM90A23P-201ENST00000400136 1395 ntBASIC17.76■□□□□ 0.43
SLF2Q8IX21 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF2Q8IX21 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF2Q8IX21 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLF2Q8IX21 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.76■□□□□ 0.43
SLF2Q8IX21 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLF2Q8IX21 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF2Q8IX21 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
SLF2Q8IX21 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.76■□□□□ 0.43
SLF2Q8IX21 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
SLF2Q8IX21 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
SLF2Q8IX21 LINC01101-201ENST00000622953 1884 ntBASIC17.75■□□□□ 0.43
SLF2Q8IX21 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLF2Q8IX21 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.75■□□□□ 0.43
SLF2Q8IX21 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLF2Q8IX21 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SLF2Q8IX21 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC17.75■□□□□ 0.43
SLF2Q8IX21 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
SLF2Q8IX21 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLF2Q8IX21 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
SLF2Q8IX21 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
SLF2Q8IX21 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
SLF2Q8IX21 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms