Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 AC092552.1-201ENST00000547243 906 ntBASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 CHCHD2P3-201ENST00000603038 451 ntBASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CCDC83Q8IWF9 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 AC136759.1-202ENST00000530858 2194 ntBASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 LSM5-207ENST00000410044 687 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 KLF2P2-201ENST00000416807 1039 ntBASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 AL442647.2-201ENST00000429864 857 ntBASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 EIF3FP3-201ENST00000434851 1086 ntBASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 AL132655.2-201ENST00000596276 594 ntBASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
CCDC83Q8IWF9 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC17.64■□□□□ 0.42
CCDC83Q8IWF9 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CCDC83Q8IWF9 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 RNA5SP421-201ENST00000516864 134 ntBASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 AC022616.1-201ENST00000518688 554 ntBASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 AC009118.2-201ENST00000613275 655 ntBASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CCDC83Q8IWF9 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms