Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 CYP46A4P-201ENST00000414953 267 ntBASIC16.68■□□□□ 0.26
TRIM50Q86XT4 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 SPTLC1P5-201ENST00000450718 252 ntBASIC16.68■□□□□ 0.26
TRIM50Q86XT4 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 RHOQP1-201ENST00000555758 579 ntBASIC16.68■□□□□ 0.26
TRIM50Q86XT4 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 EID1-202ENST00000560490 584 ntTSL 3 BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
TRIM50Q86XT4 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
TRIM50Q86XT4 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 DPM3-202ENST00000368399 517 ntBASIC16.66■□□□□ 0.26
TRIM50Q86XT4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
TRIM50Q86XT4 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms