Protein–RNA interactions for Protein: Q70EL3

USP50, Inactive ubiquitin carboxyl-terminal hydrolase 50, humanhuman

Predicted RBP Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP50Q70EL3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC17.28■□□□□ 0.36
USP50Q70EL3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP50Q70EL3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP50Q70EL3 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
USP50Q70EL3 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
USP50Q70EL3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
USP50Q70EL3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USP50Q70EL3 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
USP50Q70EL3 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP50Q70EL3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP50Q70EL3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.27■□□□□ 0.36
USP50Q70EL3 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
USP50Q70EL3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP50Q70EL3 ENPP7P8-202ENST00000527856 1345 ntBASIC17.27■□□□□ 0.36
USP50Q70EL3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.27■□□□□ 0.36
USP50Q70EL3 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USP50Q70EL3 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
USP50Q70EL3 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USP50Q70EL3 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USP50Q70EL3 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC17.27■□□□□ 0.36
USP50Q70EL3 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC17.27■□□□□ 0.36
USP50Q70EL3 OR8T1P-201ENST00000421347 918 ntBASIC17.27■□□□□ 0.36
USP50Q70EL3 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC17.27■□□□□ 0.36
USP50Q70EL3 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP50Q70EL3 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
USP50Q70EL3 SCARNA12-201ENST00000459155 270 ntBASIC17.27■□□□□ 0.36
USP50Q70EL3 RBM4-207ENST00000506523 654 ntTSL 3 BASIC17.27■□□□□ 0.36
USP50Q70EL3 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
USP50Q70EL3 AC005845.1-201ENST00000539206 653 ntTSL 3 BASIC17.27■□□□□ 0.36
USP50Q70EL3 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC17.27■□□□□ 0.36
USP50Q70EL3 AC068831.5-201ENST00000557387 328 ntBASIC17.27■□□□□ 0.36
USP50Q70EL3 AC016266.1-201ENST00000557558 729 ntTSL 3 BASIC17.27■□□□□ 0.36
USP50Q70EL3 MIR5001-201ENST00000580185 100 ntBASIC17.27■□□□□ 0.36
USP50Q70EL3 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP50Q70EL3 ZNF677-204ENST00000594681 935 ntTSL 2 BASIC17.27■□□□□ 0.36
USP50Q70EL3 AC021016.3-201ENST00000608367 477 ntBASIC17.27■□□□□ 0.36
USP50Q70EL3 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC17.27■□□□□ 0.36
USP50Q70EL3 AL591471.1-201ENST00000621855 229 ntBASIC17.27■□□□□ 0.36
USP50Q70EL3 HELLS-212ENST00000630929 400 ntTSL 5 BASIC17.27■□□□□ 0.36
USP50Q70EL3 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP50Q70EL3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP50Q70EL3 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
USP50Q70EL3 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.27■□□□□ 0.36
USP50Q70EL3 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP50Q70EL3 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
USP50Q70EL3 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP50Q70EL3 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP50Q70EL3 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
USP50Q70EL3 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP50Q70EL3 AC090616.6-203ENST00000579186 1945 ntBASIC17.27■□□□□ 0.35
USP50Q70EL3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
USP50Q70EL3 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC17.27■□□□□ 0.35
USP50Q70EL3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP50Q70EL3 PHB-210ENST00000511832 1509 ntTSL 2 BASIC17.26■□□□□ 0.35
USP50Q70EL3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP50Q70EL3 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
USP50Q70EL3 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC17.26■□□□□ 0.35
USP50Q70EL3 AC010491.1-201ENST00000563101 2797 ntBASIC17.26■□□□□ 0.35
USP50Q70EL3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP50Q70EL3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP50Q70EL3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
USP50Q70EL3 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP50Q70EL3 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP50Q70EL3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.26■□□□□ 0.35
USP50Q70EL3 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
USP50Q70EL3 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
USP50Q70EL3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP50Q70EL3 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC17.26■□□□□ 0.35
USP50Q70EL3 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP50Q70EL3 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC17.26■□□□□ 0.35
USP50Q70EL3 NMNAT3-213ENST00000512391 794 ntTSL 3 BASIC17.26■□□□□ 0.35
USP50Q70EL3 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC17.26■□□□□ 0.35
USP50Q70EL3 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP50Q70EL3 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC17.26■□□□□ 0.35
USP50Q70EL3 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP50Q70EL3 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP50Q70EL3 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC17.26■□□□□ 0.35
USP50Q70EL3 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
USP50Q70EL3 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC17.26■□□□□ 0.35
USP50Q70EL3 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.26■□□□□ 0.35
USP50Q70EL3 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC17.26■□□□□ 0.35
USP50Q70EL3 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC17.26■□□□□ 0.35
USP50Q70EL3 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
USP50Q70EL3 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC17.26■□□□□ 0.35
USP50Q70EL3 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC17.26■□□□□ 0.35
USP50Q70EL3 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC17.26■□□□□ 0.35
USP50Q70EL3 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
USP50Q70EL3 PCDHA14-201ENST00000506751 2298 ntBASIC17.26■□□□□ 0.35
USP50Q70EL3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.25■□□□□ 0.35
USP50Q70EL3 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
USP50Q70EL3 MC5R-201ENST00000324750 1319 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
USP50Q70EL3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP50Q70EL3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC17.25■□□□□ 0.35
USP50Q70EL3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.25■□□□□ 0.35
USP50Q70EL3 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
USP50Q70EL3 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
USP50Q70EL3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.25■□□□□ 0.35
USP50Q70EL3 IGHV5-51-201ENST00000390626 410 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
USP50Q70EL3 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC17.25■□□□□ 0.35
USP50Q70EL3 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms