Protein–RNA interactions for Protein: Q6STE5

SMARCD3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, humanhuman

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3Q6STE5 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.77□□□□□ -0.2
SMARCD3Q6STE5 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
SMARCD3Q6STE5 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 AC067863.1-201ENST00000494933 530 ntBASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 AL158211.3-201ENST00000607385 239 ntBASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
SMARCD3Q6STE5 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 AC100757.3-201ENST00000622361 1406 ntBASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 AC114501.2-201ENST00000439631 535 ntBASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 AL158212.4-201ENST00000624062 1286 ntBASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 AC079781.4-201ENST00000641908 219 ntBASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.76□□□□□ -0.21
SMARCD3Q6STE5 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMARCD3Q6STE5 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
SMARCD3Q6STE5 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.75□□□□□ -0.21
SMARCD3Q6STE5 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMARCD3Q6STE5 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMARCD3Q6STE5 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
SMARCD3Q6STE5 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.75□□□□□ -0.21
SMARCD3Q6STE5 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC13.75□□□□□ -0.21
SMARCD3Q6STE5 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 47.8 ms