Protein–RNA interactions for Protein: Q6NUP7

PPP4R4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, humanhuman

Predictions only

Length 873 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4Q6NUP7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 AC055876.3-201ENST00000431496 288 ntBASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 AC061975.2-201ENST00000581722 295 ntBASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 AC138649.4-201ENST00000612222 287 ntBASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 SLC4A5-205ENST00000394019 6348 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
PPP4R4Q6NUP7 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 CICP8-201ENST00000455800 2813 ntBASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 GHSR-202ENST00000427970 912 ntBASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 AL139010.1-201ENST00000454878 894 ntBASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 AC097493.3-201ENST00000509725 367 ntBASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 AC015911.4-201ENST00000588022 1070 ntBASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 AC097359.3-201ENST00000603982 1210 ntBASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 DGCR9-201ENST00000609630 2415 ntBASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
PPP4R4Q6NUP7 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
PPP4R4Q6NUP7 AC084364.1-201ENST00000551967 1556 ntBASIC14.47□□□□□ -0.09
PPP4R4Q6NUP7 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PPP4R4Q6NUP7 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
PPP4R4Q6NUP7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms