Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
HMGCS1Q01581 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.51□□□□□ -0.09
HMGCS1Q01581 C1R-202ENST00000536053 2347 ntTSL 2 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 AL139094.1-201ENST00000405549 1188 ntBASIC14.5□□□□□ -0.09
HMGCS1Q01581 NUS1P3-201ENST00000423502 862 ntBASIC14.5□□□□□ -0.09
HMGCS1Q01581 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 AC104596.2-201ENST00000512793 793 ntBASIC14.5□□□□□ -0.09
HMGCS1Q01581 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 RPS15-202ENST00000585665 467 ntTSL 3 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 PRSS30P-206ENST00000641773 873 ntBASIC14.5□□□□□ -0.09
HMGCS1Q01581 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
HMGCS1Q01581 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.5□□□□□ -0.09
HMGCS1Q01581 AC015802.1-201ENST00000588104 1449 ntBASIC14.49□□□□□ -0.09
HMGCS1Q01581 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 RNU1-114P-201ENST00000365297 166 ntBASIC14.49□□□□□ -0.09
HMGCS1Q01581 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
HMGCS1Q01581 AC098850.1-201ENST00000419919 790 ntBASIC14.49□□□□□ -0.09
HMGCS1Q01581 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 SPTLC1P1-201ENST00000447199 261 ntBASIC14.49□□□□□ -0.09
HMGCS1Q01581 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 GLI4-203ENST00000517468 963 ntTSL 5 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 AL359711.2-201ENST00000563105 872 ntBASIC14.49□□□□□ -0.09
HMGCS1Q01581 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.49□□□□□ -0.09
HMGCS1Q01581 MIR4745-201ENST00000577608 62 ntBASIC14.49□□□□□ -0.09
HMGCS1Q01581 AC099568.2-201ENST00000609194 695 ntBASIC14.49□□□□□ -0.09
HMGCS1Q01581 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms