Protein–RNA interactions for Protein: P68133

ACTA1, Actin, alpha skeletal muscle, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTA1P68133 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ACTA1P68133 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ACTA1P68133 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ACTA1P68133 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ACTA1P68133 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.43□□□□□ -0.26
ACTA1P68133 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.43□□□□□ -0.26
ACTA1P68133 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.43□□□□□ -0.26
ACTA1P68133 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.43□□□□□ -0.26
ACTA1P68133 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ACTA1P68133 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.43□□□□□ -0.26
ACTA1P68133 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC13.43□□□□□ -0.26
ACTA1P68133 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ACTA1P68133 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ACTA1P68133 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.43□□□□□ -0.26
ACTA1P68133 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.43□□□□□ -0.26
ACTA1P68133 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
ACTA1P68133 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ACTA1P68133 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.43□□□□□ -0.26
ACTA1P68133 AL137783.1-201ENST00000623494 1896 ntBASIC13.43□□□□□ -0.26
ACTA1P68133 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.43□□□□□ -0.26
ACTA1P68133 AL109936.8-201ENST00000641772 604 ntBASIC13.43□□□□□ -0.26
ACTA1P68133 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ACTA1P68133 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ACTA1P68133 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ACTA1P68133 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
ACTA1P68133 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ACTA1P68133 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
ACTA1P68133 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.43□□□□□ -0.26
ACTA1P68133 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
ACTA1P68133 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ACTA1P68133 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
ACTA1P68133 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
ACTA1P68133 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
ACTA1P68133 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC13.43□□□□□ -0.26
ACTA1P68133 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
ACTA1P68133 AL122018.1-201ENST00000446607 2310 ntBASIC13.42□□□□□ -0.26
ACTA1P68133 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ACTA1P68133 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.42□□□□□ -0.26
ACTA1P68133 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.42□□□□□ -0.26
ACTA1P68133 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
ACTA1P68133 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
ACTA1P68133 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.42□□□□□ -0.26
ACTA1P68133 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.42□□□□□ -0.26
ACTA1P68133 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.42□□□□□ -0.26
ACTA1P68133 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.42□□□□□ -0.26
ACTA1P68133 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
ACTA1P68133 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.42□□□□□ -0.26
ACTA1P68133 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
ACTA1P68133 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.42□□□□□ -0.26
ACTA1P68133 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.42□□□□□ -0.26
ACTA1P68133 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.42□□□□□ -0.26
ACTA1P68133 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.42□□□□□ -0.26
ACTA1P68133 AC004967.1-201ENST00000453589 447 ntBASIC13.42□□□□□ -0.26
ACTA1P68133 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.42□□□□□ -0.26
ACTA1P68133 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.42□□□□□ -0.26
ACTA1P68133 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.42□□□□□ -0.26
ACTA1P68133 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 TIMM17BP1-201ENST00000545713 516 ntBASIC13.42□□□□□ -0.26
ACTA1P68133 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.42□□□□□ -0.26
ACTA1P68133 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
ACTA1P68133 COQ4-205ENST00000609948 956 ntTSL 2 BASIC13.42□□□□□ -0.26
ACTA1P68133 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 TEX28P1-201ENST00000613479 1221 ntBASIC13.42□□□□□ -0.26
ACTA1P68133 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.42□□□□□ -0.26
ACTA1P68133 TEX28P2-201ENST00000617764 1221 ntBASIC13.42□□□□□ -0.26
ACTA1P68133 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
ACTA1P68133 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.42□□□□□ -0.26
ACTA1P68133 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC13.42□□□□□ -0.26
ACTA1P68133 AC134684.3-201ENST00000641758 218 ntBASIC13.42□□□□□ -0.26
ACTA1P68133 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.42□□□□□ -0.26
ACTA1P68133 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.42□□□□□ -0.26
ACTA1P68133 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC13.42□□□□□ -0.26
ACTA1P68133 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.42□□□□□ -0.26
ACTA1P68133 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
ACTA1P68133 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC13.42□□□□□ -0.26
ACTA1P68133 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms