Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CLDN8P56748 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CLDN8P56748 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 RNU1-114P-201ENST00000365297 166 ntBASIC14.28□□□□□ -0.12
CLDN8P56748 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CLDN8P56748 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CLDN8P56748 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.28□□□□□ -0.12
CLDN8P56748 TLE1P1-201ENST00000422965 589 ntBASIC14.28□□□□□ -0.12
CLDN8P56748 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.28□□□□□ -0.12
CLDN8P56748 AL442647.2-201ENST00000429864 857 ntBASIC14.28□□□□□ -0.12
CLDN8P56748 GNAQP1-201ENST00000444815 1067 ntBASIC14.28□□□□□ -0.12
CLDN8P56748 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN8P56748 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.28□□□□□ -0.12
CLDN8P56748 GIMAP3P-201ENST00000495150 836 ntBASIC14.28□□□□□ -0.12
CLDN8P56748 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CLDN8P56748 AP001582.1-201ENST00000525856 295 ntBASIC14.28□□□□□ -0.12
CLDN8P56748 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN8P56748 AC055876.2-201ENST00000531834 546 ntBASIC14.28□□□□□ -0.12
CLDN8P56748 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.28□□□□□ -0.12
CLDN8P56748 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN8P56748 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.28□□□□□ -0.12
CLDN8P56748 AC092364.2-202ENST00000597012 1073 ntBASIC14.28□□□□□ -0.12
CLDN8P56748 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CLDN8P56748 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC14.28□□□□□ -0.12
CLDN8P56748 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CLDN8P56748 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
CLDN8P56748 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CLDN8P56748 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CLDN8P56748 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC14.28□□□□□ -0.12
CLDN8P56748 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CLDN8P56748 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN8P56748 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN8P56748 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN8P56748 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN8P56748 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN8P56748 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN8P56748 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.27□□□□□ -0.12
CLDN8P56748 AL359881.3-201ENST00000602640 1721 ntBASIC14.27□□□□□ -0.12
CLDN8P56748 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN8P56748 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN8P56748 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.27□□□□□ -0.12
CLDN8P56748 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC14.27□□□□□ -0.12
CLDN8P56748 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
CLDN8P56748 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN8P56748 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
CLDN8P56748 SLC7A15P-201ENST00000424028 1363 ntBASIC14.27□□□□□ -0.12
CLDN8P56748 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.12
CLDN8P56748 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN8P56748 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN8P56748 PNMT-202ENST00000394246 821 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN8P56748 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN8P56748 KLF2P2-201ENST00000416807 1039 ntBASIC14.27□□□□□ -0.13
CLDN8P56748 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN8P56748 AC007969.1-201ENST00000433675 447 ntBASIC14.27□□□□□ -0.13
CLDN8P56748 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CLDN8P56748 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.27□□□□□ -0.13
CLDN8P56748 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC14.27□□□□□ -0.13
CLDN8P56748 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.27□□□□□ -0.13
CLDN8P56748 AC124283.3-201ENST00000570869 594 ntBASIC14.27□□□□□ -0.13
CLDN8P56748 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.27□□□□□ -0.13
CLDN8P56748 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN8P56748 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.27□□□□□ -0.13
CLDN8P56748 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN8P56748 AC139530.3-201ENST00000620344 690 ntBASIC14.27□□□□□ -0.13
CLDN8P56748 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN8P56748 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN8P56748 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN8P56748 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC14.27□□□□□ -0.13
CLDN8P56748 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN8P56748 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN8P56748 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN8P56748 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
CLDN8P56748 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
CLDN8P56748 TK2-221ENST00000620035 5060 ntTSL 2 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms