Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
FOXG1P55316 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.13□□□□□ -0.31
FOXG1P55316 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
FOXG1P55316 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.13□□□□□ -0.31
FOXG1P55316 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.13□□□□□ -0.31
FOXG1P55316 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
FOXG1P55316 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
FOXG1P55316 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
FOXG1P55316 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.12□□□□□ -0.31
FOXG1P55316 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
FOXG1P55316 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
FOXG1P55316 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.12□□□□□ -0.31
FOXG1P55316 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.12□□□□□ -0.31
FOXG1P55316 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.12□□□□□ -0.31
FOXG1P55316 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC13.12□□□□□ -0.31
FOXG1P55316 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
FOXG1P55316 TISP43-201ENST00000409793 538 ntTSL 4 BASIC13.12□□□□□ -0.31
FOXG1P55316 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.12□□□□□ -0.31
FOXG1P55316 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.12□□□□□ -0.31
FOXG1P55316 GOLGA2P4-201ENST00000441462 777 ntBASIC13.12□□□□□ -0.31
FOXG1P55316 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.12□□□□□ -0.31
FOXG1P55316 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.12□□□□□ -0.31
FOXG1P55316 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
FOXG1P55316 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.12□□□□□ -0.31
FOXG1P55316 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.12□□□□□ -0.31
FOXG1P55316 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.12□□□□□ -0.31
FOXG1P55316 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.12□□□□□ -0.31
FOXG1P55316 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.12□□□□□ -0.31
FOXG1P55316 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.12□□□□□ -0.31
FOXG1P55316 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.12□□□□□ -0.31
FOXG1P55316 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
FOXG1P55316 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
FOXG1P55316 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC13.12□□□□□ -0.31
FOXG1P55316 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
FOXG1P55316 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
FOXG1P55316 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
FOXG1P55316 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.12□□□□□ -0.31
FOXG1P55316 AC067930.6-201ENST00000623257 4947 ntBASIC13.12□□□□□ -0.31
FOXG1P55316 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
FOXG1P55316 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXG1P55316 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
FOXG1P55316 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FOXG1P55316 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.11□□□□□ -0.31
FOXG1P55316 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.11□□□□□ -0.31
FOXG1P55316 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXG1P55316 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC13.11□□□□□ -0.31
FOXG1P55316 AC007292.2-201ENST00000593524 1812 ntBASIC13.11□□□□□ -0.31
FOXG1P55316 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXG1P55316 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FOXG1P55316 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXG1P55316 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXG1P55316 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXG1P55316 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXG1P55316 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
FOXG1P55316 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXG1P55316 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.11□□□□□ -0.31
FOXG1P55316 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXG1P55316 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXG1P55316 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXG1P55316 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXG1P55316 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.11□□□□□ -0.31
FOXG1P55316 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.11□□□□□ -0.31
FOXG1P55316 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
FOXG1P55316 SERF2-209ENST00000409646 559 ntTSL 4 BASIC13.11□□□□□ -0.31
FOXG1P55316 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms