Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDH4P55283 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDH4P55283 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH4P55283 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CDH4P55283 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 BRWD1P1-201ENST00000401091 371 ntBASIC15.29■□□□□ 0.04
CDH4P55283 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.29■□□□□ 0.04
CDH4P55283 MIR1908-201ENST00000410394 80 ntBASIC15.29■□□□□ 0.04
CDH4P55283 BTBD6P1-201ENST00000412176 1267 ntBASIC15.29■□□□□ 0.04
CDH4P55283 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 MTX1P1-201ENST00000440904 838 ntBASIC15.29■□□□□ 0.04
CDH4P55283 GOLGA2P4-201ENST00000441462 777 ntBASIC15.29■□□□□ 0.04
CDH4P55283 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDH4P55283 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH4P55283 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC15.29■□□□□ 0.04
CDH4P55283 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
CDH4P55283 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH4P55283 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC15.29■□□□□ 0.04
CDH4P55283 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH4P55283 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CDH4P55283 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CDH4P55283 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CDH4P55283 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 AC007292.2-201ENST00000593524 1812 ntBASIC15.29■□□□□ 0.04
CDH4P55283 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CDH4P55283 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.29■□□□□ 0.04
CDH4P55283 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.29■□□□□ 0.04
CDH4P55283 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH4P55283 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH4P55283 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH4P55283 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH4P55283 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH4P55283 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC15.28■□□□□ 0.04
CDH4P55283 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
CDH4P55283 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH4P55283 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH4P55283 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDH4P55283 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH4P55283 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH4P55283 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH4P55283 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH4P55283 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH4P55283 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH4P55283 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH4P55283 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH4P55283 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH4P55283 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH4P55283 MIR326-201ENST00000362220 95 ntBASIC15.28■□□□□ 0.04
CDH4P55283 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.28■□□□□ 0.04
CDH4P55283 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH4P55283 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDH4P55283 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.28■□□□□ 0.04
CDH4P55283 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH4P55283 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
CDH4P55283 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH4P55283 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.28■□□□□ 0.04
CDH4P55283 AC008825.2-201ENST00000603374 718 ntBASIC15.28■□□□□ 0.04
CDH4P55283 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
CDH4P55283 AP001002.3-201ENST00000623482 206 ntBASIC15.28■□□□□ 0.04
CDH4P55283 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDH4P55283 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH4P55283 FGD5P1-202ENST00000614866 2498 ntBASIC15.28■□□□□ 0.04
CDH4P55283 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH4P55283 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.28■□□□□ 0.04
CDH4P55283 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH4P55283 AC013726.1-201ENST00000563747 2285 ntBASIC15.28■□□□□ 0.04
CDH4P55283 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH4P55283 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CDH4P55283 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
CDH4P55283 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
CDH4P55283 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH4P55283 DBET-201ENST00000630918 3363 ntBASIC15.27■□□□□ 0.04
CDH4P55283 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH4P55283 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
CDH4P55283 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH4P55283 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH4P55283 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH4P55283 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH4P55283 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
CDH4P55283 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.27■□□□□ 0.04
CDH4P55283 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
CDH4P55283 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms