Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP11P51784 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP11P51784 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USP11P51784 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
USP11P51784 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
USP11P51784 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
USP11P51784 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
USP11P51784 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
USP11P51784 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP11P51784 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC16.88■□□□□ 0.29
USP11P51784 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
USP11P51784 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC16.88■□□□□ 0.29
USP11P51784 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
USP11P51784 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP11P51784 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP11P51784 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.88■□□□□ 0.29
USP11P51784 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP11P51784 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP11P51784 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP11P51784 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP11P51784 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP11P51784 AC010141.1-201ENST00000411585 623 ntBASIC16.88■□□□□ 0.29
USP11P51784 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.88■□□□□ 0.29
USP11P51784 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP11P51784 HIST2H2BB-201ENST00000449108 381 ntBASIC16.88■□□□□ 0.29
USP11P51784 RPL13AP20-201ENST00000459725 609 ntBASIC16.88■□□□□ 0.29
USP11P51784 AC100850.1-201ENST00000506768 649 ntBASIC16.88■□□□□ 0.29
USP11P51784 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP11P51784 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.88■□□□□ 0.29
USP11P51784 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
USP11P51784 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC16.88■□□□□ 0.29
USP11P51784 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC16.88■□□□□ 0.29
USP11P51784 AL033527.4-201ENST00000641026 673 ntBASIC16.88■□□□□ 0.29
USP11P51784 AC092135.3-201ENST00000624151 1846 ntBASIC16.88■□□□□ 0.29
USP11P51784 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.88■□□□□ 0.29
USP11P51784 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
USP11P51784 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC16.88■□□□□ 0.29
USP11P51784 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP11P51784 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.88■□□□□ 0.29
USP11P51784 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP11P51784 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP11P51784 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC16.88■□□□□ 0.29
USP11P51784 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
USP11P51784 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP11P51784 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP11P51784 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP11P51784 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
USP11P51784 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP11P51784 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.87■□□□□ 0.29
USP11P51784 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
USP11P51784 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP11P51784 KLK1-201ENST00000301420 866 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP11P51784 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
USP11P51784 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.87■□□□□ 0.29
USP11P51784 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC16.87■□□□□ 0.29
USP11P51784 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC16.87■□□□□ 0.29
USP11P51784 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.87■□□□□ 0.29
USP11P51784 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.87■□□□□ 0.29
USP11P51784 TISP43-201ENST00000409793 538 ntTSL 4 BASIC16.87■□□□□ 0.29
USP11P51784 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP11P51784 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC16.87■□□□□ 0.29
USP11P51784 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP11P51784 PUDPP3-201ENST00000445368 636 ntBASIC16.87■□□□□ 0.29
USP11P51784 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP11P51784 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
USP11P51784 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.87■□□□□ 0.29
USP11P51784 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.87■□□□□ 0.29
USP11P51784 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.87■□□□□ 0.29
USP11P51784 AP001002.3-201ENST00000623482 206 ntBASIC16.87■□□□□ 0.29
USP11P51784 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP11P51784 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP11P51784 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
USP11P51784 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP11P51784 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP11P51784 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP11P51784 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
USP11P51784 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
USP11P51784 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
USP11P51784 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
USP11P51784 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.87■□□□□ 0.29
USP11P51784 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP11P51784 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
USP11P51784 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP11P51784 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.86■□□□□ 0.29
USP11P51784 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP11P51784 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
USP11P51784 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
USP11P51784 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC16.86■□□□□ 0.29
USP11P51784 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC16.86■□□□□ 0.29
USP11P51784 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
USP11P51784 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
USP11P51784 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP11P51784 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC16.86■□□□□ 0.29
USP11P51784 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP11P51784 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
USP11P51784 RPF1-202ENST00000370656 724 ntTSL 2 BASIC16.86■□□□□ 0.29
USP11P51784 APOC3-202ENST00000375345 604 ntTSL 5 BASIC16.86■□□□□ 0.29
USP11P51784 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
USP11P51784 GOLGA2P4-201ENST00000441462 777 ntBASIC16.86■□□□□ 0.29
USP11P51784 Z93015.1-201ENST00000451718 390 ntBASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms