Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SRP9P49458 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.42□□□□□ -0.26
SRP9P49458 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SRP9P49458 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
SRP9P49458 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SRP9P49458 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SRP9P49458 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SRP9P49458 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.42□□□□□ -0.26
SRP9P49458 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.42□□□□□ -0.26
SRP9P49458 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SRP9P49458 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
SRP9P49458 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
SRP9P49458 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC13.42□□□□□ -0.26
SRP9P49458 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
SRP9P49458 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SRP9P49458 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SRP9P49458 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SRP9P49458 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.41□□□□□ -0.26
SRP9P49458 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.41□□□□□ -0.26
SRP9P49458 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SRP9P49458 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SRP9P49458 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SRP9P49458 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.41□□□□□ -0.26
SRP9P49458 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC13.41□□□□□ -0.26
SRP9P49458 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
SRP9P49458 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.41□□□□□ -0.26
SRP9P49458 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SRP9P49458 AC114501.2-201ENST00000439631 535 ntBASIC13.41□□□□□ -0.26
SRP9P49458 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.41□□□□□ -0.26
SRP9P49458 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 SLED1-202ENST00000512051 380 ntBASIC13.41□□□□□ -0.26
SRP9P49458 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC13.41□□□□□ -0.26
SRP9P49458 SPCS2P1-201ENST00000561636 679 ntBASIC13.41□□□□□ -0.26
SRP9P49458 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.41□□□□□ -0.26
SRP9P49458 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SRP9P49458 AC097359.3-201ENST00000603982 1210 ntBASIC13.41□□□□□ -0.26
SRP9P49458 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.41□□□□□ -0.26
SRP9P49458 AC009118.2-201ENST00000613275 655 ntBASIC13.41□□□□□ -0.26
SRP9P49458 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.41□□□□□ -0.26
SRP9P49458 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.41□□□□□ -0.26
SRP9P49458 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
SRP9P49458 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SRP9P49458 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.41□□□□□ -0.26
SRP9P49458 AL359881.3-201ENST00000602640 1721 ntBASIC13.41□□□□□ -0.26
SRP9P49458 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC13.41□□□□□ -0.26
SRP9P49458 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
SRP9P49458 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC13.41□□□□□ -0.26
SRP9P49458 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SRP9P49458 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SRP9P49458 AL607033.1-201ENST00000623900 1599 ntBASIC13.41□□□□□ -0.26
SRP9P49458 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 AC027612.1-201ENST00000445234 2395 ntBASIC13.4□□□□□ -0.26
SRP9P49458 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
SRP9P49458 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SRP9P49458 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.4□□□□□ -0.26
SRP9P49458 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.4□□□□□ -0.26
SRP9P49458 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
SRP9P49458 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SRP9P49458 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.4□□□□□ -0.26
SRP9P49458 MST1P2-201ENST00000457982 2291 ntBASIC13.4□□□□□ -0.26
SRP9P49458 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.4□□□□□ -0.26
SRP9P49458 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SRP9P49458 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.4□□□□□ -0.26
SRP9P49458 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms