Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP8P40818 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC16.46■□□□□ 0.23
USP8P40818 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.46■□□□□ 0.23
USP8P40818 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP8P40818 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP8P40818 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
USP8P40818 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP8P40818 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP8P40818 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP8P40818 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP8P40818 MEP1AP4-201ENST00000423244 1087 ntBASIC16.46■□□□□ 0.23
USP8P40818 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP8P40818 SERBP1P5-201ENST00000510079 1181 ntBASIC16.46■□□□□ 0.23
USP8P40818 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC16.46■□□□□ 0.23
USP8P40818 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
USP8P40818 AC004233.3-201ENST00000607794 1269 ntBASIC16.46■□□□□ 0.23
USP8P40818 AC009118.2-201ENST00000613275 655 ntBASIC16.46■□□□□ 0.23
USP8P40818 SERF2-217ENST00000630046 862 ntTSL 5 BASIC16.46■□□□□ 0.23
USP8P40818 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP8P40818 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.46■□□□□ 0.23
USP8P40818 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP8P40818 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP8P40818 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
USP8P40818 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP8P40818 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP8P40818 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
USP8P40818 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
USP8P40818 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC16.46■□□□□ 0.23
USP8P40818 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
USP8P40818 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC16.46■□□□□ 0.23
USP8P40818 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
USP8P40818 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC16.46■□□□□ 0.22
USP8P40818 CICP20-201ENST00000443330 2801 ntBASIC16.46■□□□□ 0.22
USP8P40818 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
USP8P40818 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.45■□□□□ 0.22
USP8P40818 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.45■□□□□ 0.22
USP8P40818 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 DRD5P1-201ENST00000456605 1438 ntBASIC16.45■□□□□ 0.22
USP8P40818 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
USP8P40818 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.45■□□□□ 0.22
USP8P40818 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.45■□□□□ 0.22
USP8P40818 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 USP31-203ENST00000567975 2142 ntTSL 2 BASIC16.45■□□□□ 0.22
USP8P40818 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
USP8P40818 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.45■□□□□ 0.22
USP8P40818 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.45■□□□□ 0.22
USP8P40818 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.45■□□□□ 0.22
USP8P40818 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
USP8P40818 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.45■□□□□ 0.22
USP8P40818 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
USP8P40818 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.45■□□□□ 0.22
USP8P40818 AC104596.2-201ENST00000512793 793 ntBASIC16.45■□□□□ 0.22
USP8P40818 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC16.45■□□□□ 0.22
USP8P40818 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
USP8P40818 AC107373.2-201ENST00000607735 490 ntBASIC16.45■□□□□ 0.22
USP8P40818 MIR8072-201ENST00000614241 80 ntBASIC16.45■□□□□ 0.22
USP8P40818 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.45■□□□□ 0.22
USP8P40818 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC16.45■□□□□ 0.22
USP8P40818 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC16.45■□□□□ 0.22
USP8P40818 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC16.45■□□□□ 0.22
USP8P40818 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
USP8P40818 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
USP8P40818 AC005912.2-201ENST00000619492 2400 ntBASIC16.45■□□□□ 0.22
USP8P40818 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 AL390755.1-201ENST00000623716 2027 ntBASIC16.45■□□□□ 0.22
USP8P40818 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
USP8P40818 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP8P40818 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC16.44■□□□□ 0.22
USP8P40818 AL157414.3-201ENST00000624276 1954 ntBASIC16.44■□□□□ 0.22
USP8P40818 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP8P40818 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP8P40818 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
USP8P40818 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
USP8P40818 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP8P40818 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
USP8P40818 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms