Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.74■□□□□ 0.59
COL15A1P39059 AC007292.2-201ENST00000593524 1812 ntBASIC18.74■□□□□ 0.59
COL15A1P39059 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
COL15A1P39059 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC18.74■□□□□ 0.59
COL15A1P39059 AC026320.2-201ENST00000434379 478 ntBASIC18.74■□□□□ 0.59
COL15A1P39059 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 RBM8B-201ENST00000555532 525 ntBASIC18.74■□□□□ 0.59
COL15A1P39059 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC18.74■□□□□ 0.59
COL15A1P39059 AC005632.3-201ENST00000605544 308 ntBASIC18.74■□□□□ 0.59
COL15A1P39059 AP001065.2-201ENST00000617205 644 ntBASIC18.74■□□□□ 0.59
COL15A1P39059 SLC12A5-216ENST00000626701 617 ntTSL 3 BASIC18.74■□□□□ 0.59
COL15A1P39059 HLA-C-210ENST00000640219 976 ntBASIC18.74■□□□□ 0.59
COL15A1P39059 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC18.74■□□□□ 0.59
COL15A1P39059 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC18.74■□□□□ 0.59
COL15A1P39059 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 LINC00554-201ENST00000564841 3011 ntBASIC18.74■□□□□ 0.59
COL15A1P39059 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC18.74■□□□□ 0.59
COL15A1P39059 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL15A1P39059 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL15A1P39059 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL15A1P39059 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC18.73■□□□□ 0.59
COL15A1P39059 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL15A1P39059 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COL15A1P39059 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.73■□□□□ 0.59
COL15A1P39059 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
COL15A1P39059 OR6D1P-203ENST00000641209 4860 ntBASIC18.73■□□□□ 0.59
COL15A1P39059 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL15A1P39059 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
COL15A1P39059 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
COL15A1P39059 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL15A1P39059 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC18.73■□□□□ 0.59
COL15A1P39059 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL15A1P39059 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL15A1P39059 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC18.73■□□□□ 0.59
COL15A1P39059 AL512430.1-201ENST00000392575 860 ntBASIC18.73■□□□□ 0.59
COL15A1P39059 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC18.73■□□□□ 0.59
COL15A1P39059 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC18.73■□□□□ 0.59
COL15A1P39059 XBP1P1-201ENST00000436573 652 ntBASIC18.73■□□□□ 0.59
COL15A1P39059 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC18.73■□□□□ 0.59
COL15A1P39059 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC18.73■□□□□ 0.59
COL15A1P39059 NAGK-204ENST00000443872 878 ntTSL 3 BASIC18.73■□□□□ 0.59
COL15A1P39059 AL035414.1-201ENST00000451327 857 ntBASIC18.73■□□□□ 0.59
COL15A1P39059 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC18.73■□□□□ 0.59
COL15A1P39059 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC18.73■□□□□ 0.59
COL15A1P39059 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
COL15A1P39059 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC18.73■□□□□ 0.59
COL15A1P39059 TPM1-223ENST00000560445 485 ntTSL 3 BASIC18.73■□□□□ 0.59
COL15A1P39059 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COL15A1P39059 AL031713.1-201ENST00000564813 661 ntBASIC18.73■□□□□ 0.59
COL15A1P39059 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC18.73■□□□□ 0.59
COL15A1P39059 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC18.73■□□□□ 0.59
COL15A1P39059 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL15A1P39059 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL15A1P39059 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL15A1P39059 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.73■□□□□ 0.59
COL15A1P39059 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL15A1P39059 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL15A1P39059 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL15A1P39059 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL15A1P39059 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL15A1P39059 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC18.73■□□□□ 0.59
COL15A1P39059 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL15A1P39059 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COL15A1P39059 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL15A1P39059 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18.73■□□□□ 0.59
COL15A1P39059 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL15A1P39059 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL15A1P39059 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL15A1P39059 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.72■□□□□ 0.59
COL15A1P39059 AC023157.3-201ENST00000619086 2088 ntBASIC18.72■□□□□ 0.59
COL15A1P39059 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
COL15A1P39059 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC18.72■□□□□ 0.59
COL15A1P39059 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC18.72■□□□□ 0.59
COL15A1P39059 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
COL15A1P39059 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL15A1P39059 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC18.72■□□□□ 0.59
COL15A1P39059 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
COL15A1P39059 AL080250.1-201ENST00000438676 445 ntTSL 5 BASIC18.72■□□□□ 0.59
COL15A1P39059 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
COL15A1P39059 CTBP2P4-201ENST00000513884 920 ntBASIC18.72■□□□□ 0.59
COL15A1P39059 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC18.72■□□□□ 0.59
COL15A1P39059 RPL17P45-201ENST00000586289 509 ntBASIC18.72■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms