Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
GPC1P35052 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.35□□□□□ -0.11
GPC1P35052 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
GPC1P35052 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC14.35□□□□□ -0.11
GPC1P35052 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.35□□□□□ -0.11
GPC1P35052 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.35□□□□□ -0.11
GPC1P35052 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC14.35□□□□□ -0.11
GPC1P35052 AC134915.1-201ENST00000426461 574 ntBASIC14.35□□□□□ -0.11
GPC1P35052 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.35□□□□□ -0.11
GPC1P35052 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 GAPDHP40-201ENST00000505218 1006 ntBASIC14.35□□□□□ -0.11
GPC1P35052 AC026410.3-201ENST00000514280 936 ntBASIC14.35□□□□□ -0.11
GPC1P35052 AC004233.3-201ENST00000607794 1269 ntBASIC14.35□□□□□ -0.11
GPC1P35052 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
GPC1P35052 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC14.35□□□□□ -0.11
GPC1P35052 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
GPC1P35052 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.35□□□□□ -0.11
GPC1P35052 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.35□□□□□ -0.11
GPC1P35052 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.35□□□□□ -0.11
GPC1P35052 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
GPC1P35052 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.35□□□□□ -0.11
GPC1P35052 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
GPC1P35052 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.35□□□□□ -0.11
GPC1P35052 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.35□□□□□ -0.11
GPC1P35052 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.35□□□□□ -0.11
GPC1P35052 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
GPC1P35052 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
GPC1P35052 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.34□□□□□ -0.11
GPC1P35052 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GPC1P35052 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GPC1P35052 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GPC1P35052 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
GPC1P35052 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
GPC1P35052 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.34□□□□□ -0.11
GPC1P35052 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 INTS4P2-202ENST00000614726 2019 ntBASIC14.34□□□□□ -0.11
GPC1P35052 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.34□□□□□ -0.11
GPC1P35052 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 AL158070.2-201ENST00000623713 1621 ntBASIC14.34□□□□□ -0.11
GPC1P35052 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.34□□□□□ -0.11
GPC1P35052 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.34□□□□□ -0.11
GPC1P35052 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GPC1P35052 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
GPC1P35052 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.34□□□□□ -0.11
GPC1P35052 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC14.34□□□□□ -0.11
GPC1P35052 MTND4LP12-201ENST00000448237 295 ntBASIC14.34□□□□□ -0.11
GPC1P35052 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC14.34□□□□□ -0.11
GPC1P35052 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
GPC1P35052 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC14.34□□□□□ -0.11
GPC1P35052 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC14.34□□□□□ -0.11
GPC1P35052 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.34□□□□□ -0.11
GPC1P35052 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.34□□□□□ -0.11
GPC1P35052 AC027796.2-201ENST00000575326 344 ntBASIC14.34□□□□□ -0.11
GPC1P35052 AC093813.1-201ENST00000605066 256 ntBASIC14.34□□□□□ -0.11
GPC1P35052 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
GPC1P35052 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
GPC1P35052 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.34□□□□□ -0.11
GPC1P35052 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.34□□□□□ -0.11
GPC1P35052 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC14.34□□□□□ -0.11
GPC1P35052 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
GPC1P35052 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
GPC1P35052 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.34□□□□□ -0.11
GPC1P35052 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
GPC1P35052 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
GPC1P35052 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms