Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC19.07■□□□□ 0.64
RXRBP28702 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
RXRBP28702 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
RXRBP28702 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC19.07■□□□□ 0.64
RXRBP28702 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.07■□□□□ 0.64
RXRBP28702 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RXRBP28702 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
RXRBP28702 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
RXRBP28702 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
RXRBP28702 BRD7P5-201ENST00000299197 1822 ntBASIC19.07■□□□□ 0.64
RXRBP28702 AL365181.1-201ENST00000564032 1828 ntBASIC19.07■□□□□ 0.64
RXRBP28702 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
RXRBP28702 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
RXRBP28702 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
RXRBP28702 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 XAGE2-201ENST00000286049 618 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 TISP43-202ENST00000409982 1039 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 AL391839.2-201ENST00000412085 383 ntTSL 5 BASIC19.06■□□□□ 0.64
RXRBP28702 IP6K2-223ENST00000453202 571 ntTSL 4 BASIC19.06■□□□□ 0.64
RXRBP28702 AC008494.1-201ENST00000497612 796 ntBASIC19.06■□□□□ 0.64
RXRBP28702 AC008443.1-202ENST00000506340 687 ntTSL 2 BASIC19.06■□□□□ 0.64
RXRBP28702 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC19.06■□□□□ 0.64
RXRBP28702 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC19.06■□□□□ 0.64
RXRBP28702 TPST2P1-201ENST00000564073 1102 ntBASIC19.06■□□□□ 0.64
RXRBP28702 RN7SL605P-201ENST00000577229 281 ntBASIC19.06■□□□□ 0.64
RXRBP28702 AC008555.6-201ENST00000605047 458 ntTSL 2 BASIC19.06■□□□□ 0.64
RXRBP28702 Z82244.2-201ENST00000632196 448 ntBASIC19.06■□□□□ 0.64
RXRBP28702 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 AL133373.2-201ENST00000623187 2828 ntBASIC19.06■□□□□ 0.64
RXRBP28702 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
RXRBP28702 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC19.06■□□□□ 0.64
RXRBP28702 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.06■□□□□ 0.64
RXRBP28702 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
RXRBP28702 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.06■□□□□ 0.64
RXRBP28702 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
RXRBP28702 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.05■□□□□ 0.64
RXRBP28702 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RXRBP28702 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RXRBP28702 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RXRBP28702 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RXRBP28702 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RXRBP28702 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RXRBP28702 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
RXRBP28702 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC19.05■□□□□ 0.64
RXRBP28702 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RXRBP28702 FAM21EP-201ENST00000417804 985 ntBASIC19.05■□□□□ 0.64
RXRBP28702 AC007391.1-201ENST00000433893 504 ntTSL 2 BASIC19.05■□□□□ 0.64
RXRBP28702 CDKN2A-AS1-201ENST00000441769 823 ntBASIC19.05■□□□□ 0.64
RXRBP28702 TSTD1-206ENST00000466967 477 ntTSL 2 BASIC19.05■□□□□ 0.64
RXRBP28702 RN7SL838P-201ENST00000481676 295 ntBASIC19.05■□□□□ 0.64
RXRBP28702 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC19.05■□□□□ 0.64
RXRBP28702 GLIPR1L2-203ENST00000547164 509 ntTSL 5 BASIC19.05■□□□□ 0.64
RXRBP28702 AC145285.5-201ENST00000562217 361 ntBASIC19.05■□□□□ 0.64
RXRBP28702 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC19.05■□□□□ 0.64
RXRBP28702 AC048382.6-201ENST00000621980 1223 ntBASIC19.05■□□□□ 0.64
RXRBP28702 LINC01869-204ENST00000635639 1047 ntTSL 5 BASIC19.05■□□□□ 0.64
RXRBP28702 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.05■□□□□ 0.64
RXRBP28702 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC19.05■□□□□ 0.64
RXRBP28702 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
RXRBP28702 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RXRBP28702 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RXRBP28702 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RXRBP28702 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RXRBP28702 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
RXRBP28702 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
RXRBP28702 LINC00205-201ENST00000433465 1391 ntTSL 3 BASIC19.05■□□□□ 0.64
RXRBP28702 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RXRBP28702 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
RXRBP28702 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
RXRBP28702 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
RXRBP28702 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RXRBP28702 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RXRBP28702 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RXRBP28702 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.04■□□□□ 0.64
RXRBP28702 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC19.04■□□□□ 0.64
RXRBP28702 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RXRBP28702 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RXRBP28702 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC19.04■□□□□ 0.64
RXRBP28702 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RXRBP28702 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RXRBP28702 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RXRBP28702 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RXRBP28702 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RXRBP28702 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 73.3 ms