Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC14.51□□□□□ -0.09
CAPN3P20807 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
CAPN3P20807 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14.51□□□□□ -0.09
CAPN3P20807 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CAPN3P20807 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.51□□□□□ -0.09
CAPN3P20807 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.51□□□□□ -0.09
CAPN3P20807 AL353779.1-201ENST00000434793 351 ntBASIC14.51□□□□□ -0.09
CAPN3P20807 RPS2P32-201ENST00000439199 892 ntBASIC14.51□□□□□ -0.09
CAPN3P20807 SPTLC1P1-201ENST00000447199 261 ntBASIC14.51□□□□□ -0.09
CAPN3P20807 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.51□□□□□ -0.09
CAPN3P20807 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC14.51□□□□□ -0.09
CAPN3P20807 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.51□□□□□ -0.09
CAPN3P20807 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CAPN3P20807 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC14.51□□□□□ -0.09
CAPN3P20807 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CAPN3P20807 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CAPN3P20807 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC14.51□□□□□ -0.09
CAPN3P20807 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
CAPN3P20807 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CAPN3P20807 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC14.51□□□□□ -0.09
CAPN3P20807 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CAPN3P20807 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CAPN3P20807 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN3P20807 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN3P20807 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
CAPN3P20807 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC14.5□□□□□ -0.09
CAPN3P20807 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN3P20807 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CAPN3P20807 AC023090.2-201ENST00000625182 2110 ntBASIC14.5□□□□□ -0.09
CAPN3P20807 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC14.5□□□□□ -0.09
CAPN3P20807 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN3P20807 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN3P20807 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN3P20807 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.5□□□□□ -0.09
CAPN3P20807 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN3P20807 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN3P20807 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC14.5□□□□□ -0.09
CAPN3P20807 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.5□□□□□ -0.09
CAPN3P20807 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.5□□□□□ -0.09
CAPN3P20807 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC14.5□□□□□ -0.09
CAPN3P20807 CDK4-206ENST00000549606 558 ntTSL 2 BASIC14.5□□□□□ -0.09
CAPN3P20807 AC010336.2-201ENST00000564226 506 ntBASIC14.5□□□□□ -0.09
CAPN3P20807 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.5□□□□□ -0.09
CAPN3P20807 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC14.5□□□□□ -0.09
CAPN3P20807 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN3P20807 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.5□□□□□ -0.09
CAPN3P20807 AL109936.8-201ENST00000641772 604 ntBASIC14.5□□□□□ -0.09
CAPN3P20807 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CAPN3P20807 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN3P20807 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
CAPN3P20807 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN3P20807 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN3P20807 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.5□□□□□ -0.09
CAPN3P20807 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN3P20807 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN3P20807 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN3P20807 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN3P20807 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC14.5□□□□□ -0.09
CAPN3P20807 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN3P20807 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CAPN3P20807 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
CAPN3P20807 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN3P20807 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN3P20807 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CAPN3P20807 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN3P20807 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN3P20807 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC14.49□□□□□ -0.09
CAPN3P20807 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.49□□□□□ -0.09
CAPN3P20807 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC14.49□□□□□ -0.09
CAPN3P20807 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC14.49□□□□□ -0.09
CAPN3P20807 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
CAPN3P20807 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN3P20807 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN3P20807 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.49□□□□□ -0.09
CAPN3P20807 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN3P20807 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CAPN3P20807 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC14.49□□□□□ -0.09
CAPN3P20807 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms