Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
ATF1P18846 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
ATF1P18846 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
ATF1P18846 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.23□□□□□ -0.29
ATF1P18846 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC13.23□□□□□ -0.29
ATF1P18846 TSEN15P1-201ENST00000423257 515 ntBASIC13.23□□□□□ -0.29
ATF1P18846 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC13.23□□□□□ -0.29
ATF1P18846 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC13.23□□□□□ -0.29
ATF1P18846 AC004967.1-201ENST00000453589 447 ntBASIC13.23□□□□□ -0.29
ATF1P18846 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC13.23□□□□□ -0.29
ATF1P18846 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.23□□□□□ -0.29
ATF1P18846 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.23□□□□□ -0.29
ATF1P18846 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC13.23□□□□□ -0.29
ATF1P18846 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.23□□□□□ -0.29
ATF1P18846 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
ATF1P18846 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC13.23□□□□□ -0.29
ATF1P18846 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.23□□□□□ -0.29
ATF1P18846 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC13.23□□□□□ -0.29
ATF1P18846 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC13.23□□□□□ -0.29
ATF1P18846 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.23□□□□□ -0.29
ATF1P18846 Z92544.3-201ENST00000624747 417 ntBASIC13.23□□□□□ -0.29
ATF1P18846 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.23□□□□□ -0.29
ATF1P18846 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC13.23□□□□□ -0.29
ATF1P18846 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
ATF1P18846 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC13.23□□□□□ -0.29
ATF1P18846 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
ATF1P18846 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 PPT1-213ENST00000641319 2388 ntBASIC13.23□□□□□ -0.29
ATF1P18846 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.23□□□□□ -0.29
ATF1P18846 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
ATF1P18846 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
ATF1P18846 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ATF1P18846 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.22□□□□□ -0.29
ATF1P18846 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ATF1P18846 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.22□□□□□ -0.29
ATF1P18846 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
ATF1P18846 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ATF1P18846 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.22□□□□□ -0.29
ATF1P18846 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ATF1P18846 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
ATF1P18846 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
ATF1P18846 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
ATF1P18846 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC13.22□□□□□ -0.29
ATF1P18846 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC13.22□□□□□ -0.29
ATF1P18846 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.22□□□□□ -0.29
ATF1P18846 AC125807.1-201ENST00000483097 614 ntBASIC13.22□□□□□ -0.29
ATF1P18846 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.22□□□□□ -0.29
ATF1P18846 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.22□□□□□ -0.29
ATF1P18846 AC069120.2-201ENST00000524091 540 ntBASIC13.22□□□□□ -0.29
ATF1P18846 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ATF1P18846 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.22□□□□□ -0.29
ATF1P18846 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
ATF1P18846 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC13.22□□□□□ -0.29
ATF1P18846 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.22□□□□□ -0.29
ATF1P18846 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC13.22□□□□□ -0.29
ATF1P18846 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.22□□□□□ -0.29
ATF1P18846 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC13.22□□□□□ -0.29
ATF1P18846 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.22□□□□□ -0.29
ATF1P18846 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
ATF1P18846 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms