Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
NCK1P16333 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NCK1P16333 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NCK1P16333 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NCK1P16333 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NCK1P16333 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NCK1P16333 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC14.25□□□□□ -0.13
NCK1P16333 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.25□□□□□ -0.13
NCK1P16333 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NCK1P16333 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NCK1P16333 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NCK1P16333 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.25□□□□□ -0.13
NCK1P16333 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NCK1P16333 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.24□□□□□ -0.13
NCK1P16333 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NCK1P16333 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.24□□□□□ -0.13
NCK1P16333 IMP4-203ENST00000409935 958 ntTSL 5 BASIC14.24□□□□□ -0.13
NCK1P16333 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
NCK1P16333 TOMM22P5-201ENST00000416399 439 ntBASIC14.24□□□□□ -0.13
NCK1P16333 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC14.24□□□□□ -0.13
NCK1P16333 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
NCK1P16333 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.24□□□□□ -0.13
NCK1P16333 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.24□□□□□ -0.13
NCK1P16333 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NCK1P16333 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.24□□□□□ -0.13
NCK1P16333 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC14.24□□□□□ -0.13
NCK1P16333 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
NCK1P16333 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.24□□□□□ -0.13
NCK1P16333 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.24□□□□□ -0.13
NCK1P16333 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 AL137783.1-201ENST00000623494 1896 ntBASIC14.24□□□□□ -0.13
NCK1P16333 CETN4P-206ENST00000642099 2168 ntBASIC14.24□□□□□ -0.13
NCK1P16333 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NCK1P16333 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC14.24□□□□□ -0.13
NCK1P16333 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.24□□□□□ -0.13
NCK1P16333 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC14.24□□□□□ -0.13
NCK1P16333 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.24□□□□□ -0.13
NCK1P16333 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC14.24□□□□□ -0.13
NCK1P16333 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NCK1P16333 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NCK1P16333 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.23□□□□□ -0.13
NCK1P16333 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC14.23□□□□□ -0.13
NCK1P16333 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.23□□□□□ -0.13
NCK1P16333 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC14.23□□□□□ -0.13
NCK1P16333 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
NCK1P16333 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC14.23□□□□□ -0.13
NCK1P16333 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
NCK1P16333 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
NCK1P16333 PMP22-202ENST00000395936 816 ntTSL 3 BASIC14.23□□□□□ -0.13
NCK1P16333 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NCK1P16333 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC14.23□□□□□ -0.13
NCK1P16333 AC004832.2-201ENST00000426397 482 ntBASIC14.23□□□□□ -0.13
NCK1P16333 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms