Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.78■□□□□ 0.12
RARAP10276 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.78■□□□□ 0.12
RARAP10276 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RARAP10276 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC15.78■□□□□ 0.12
RARAP10276 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC15.78■□□□□ 0.12
RARAP10276 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
RARAP10276 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
RARAP10276 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
RARAP10276 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
RARAP10276 KRT8P14-201ENST00000414254 1442 ntBASIC15.77■□□□□ 0.12
RARAP10276 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.77■□□□□ 0.12
RARAP10276 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RARAP10276 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RARAP10276 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15.77■□□□□ 0.12
RARAP10276 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RARAP10276 AC018665.1-201ENST00000622927 1362 ntBASIC15.77■□□□□ 0.12
RARAP10276 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.77■□□□□ 0.12
RARAP10276 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RARAP10276 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RARAP10276 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RARAP10276 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
RARAP10276 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RARAP10276 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RARAP10276 AL354702.1-201ENST00000442006 1960 ntBASIC15.77■□□□□ 0.12
RARAP10276 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RARAP10276 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RARAP10276 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
RARAP10276 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RARAP10276 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RARAP10276 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RARAP10276 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RARAP10276 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RARAP10276 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.77■□□□□ 0.12
RARAP10276 BRF1-202ENST00000379932 884 ntTSL 5 BASIC15.77■□□□□ 0.12
RARAP10276 WDR53-203ENST00000429115 683 ntTSL 2 BASIC15.77■□□□□ 0.12
RARAP10276 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RARAP10276 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
RARAP10276 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
RARAP10276 AC190387.1-201ENST00000551683 408 ntBASIC15.77■□□□□ 0.12
RARAP10276 WASH4P-201ENST00000564273 1246 ntBASIC15.77■□□□□ 0.12
RARAP10276 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RARAP10276 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC15.77■□□□□ 0.12
RARAP10276 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC15.77■□□□□ 0.12
RARAP10276 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.77■□□□□ 0.11
RARAP10276 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RARAP10276 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RARAP10276 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RARAP10276 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC15.77■□□□□ 0.11
RARAP10276 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.77■□□□□ 0.11
RARAP10276 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RARAP10276 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RARAP10276 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.77■□□□□ 0.11
RARAP10276 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RARAP10276 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RARAP10276 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC15.77■□□□□ 0.11
RARAP10276 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RARAP10276 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RARAP10276 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.76■□□□□ 0.11
RARAP10276 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RARAP10276 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
RARAP10276 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RARAP10276 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
RARAP10276 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.76■□□□□ 0.11
RARAP10276 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RARAP10276 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RARAP10276 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
RARAP10276 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RARAP10276 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RARAP10276 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RARAP10276 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RARAP10276 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RARAP10276 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RARAP10276 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RARAP10276 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
RARAP10276 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.76■□□□□ 0.11
RARAP10276 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.76■□□□□ 0.11
RARAP10276 AC114812.1-204ENST00000449669 728 ntBASIC15.76■□□□□ 0.11
RARAP10276 TPT1P11-201ENST00000458482 498 ntBASIC15.76■□□□□ 0.11
RARAP10276 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RARAP10276 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.76■□□□□ 0.11
RARAP10276 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RARAP10276 DUX4L47-201ENST00000566374 394 ntBASIC15.76■□□□□ 0.11
RARAP10276 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC15.76■□□□□ 0.11
RARAP10276 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.76■□□□□ 0.11
RARAP10276 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC15.76■□□□□ 0.11
RARAP10276 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.76■□□□□ 0.11
RARAP10276 WFDC1-204ENST00000613603 549 ntBASIC15.76■□□□□ 0.11
RARAP10276 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RARAP10276 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
RARAP10276 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RARAP10276 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RARAP10276 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RARAP10276 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
RARAP10276 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RARAP10276 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC15.76■□□□□ 0.11
RARAP10276 BEND3P1-201ENST00000421591 1944 ntBASIC15.76■□□□□ 0.11
RARAP10276 AC107918.4-201ENST00000641966 3141 ntBASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms