Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC13.16□□□□□ -0.3
SFTPBP07988 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SFTPBP07988 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SFTPBP07988 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SFTPBP07988 AL731571.1-201ENST00000617058 5428 ntBASIC13.16□□□□□ -0.3
SFTPBP07988 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.16□□□□□ -0.3
SFTPBP07988 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
SFTPBP07988 REXO1L2P-201ENST00000425429 2069 ntBASIC13.16□□□□□ -0.3
SFTPBP07988 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
SFTPBP07988 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC13.16□□□□□ -0.3
SFTPBP07988 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
SFTPBP07988 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.15□□□□□ -0.3
SFTPBP07988 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.15□□□□□ -0.3
SFTPBP07988 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
SFTPBP07988 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.15□□□□□ -0.3
SFTPBP07988 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
SFTPBP07988 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.15□□□□□ -0.3
SFTPBP07988 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SFTPBP07988 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SFTPBP07988 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.15□□□□□ -0.3
SFTPBP07988 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.15□□□□□ -0.3
SFTPBP07988 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.15□□□□□ -0.3
SFTPBP07988 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SFTPBP07988 AC074044.1-201ENST00000609673 707 ntBASIC13.15□□□□□ -0.3
SFTPBP07988 AL109936.8-201ENST00000641772 604 ntBASIC13.15□□□□□ -0.3
SFTPBP07988 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SFTPBP07988 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.15□□□□□ -0.3
SFTPBP07988 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 TMPRSS9-201ENST00000332578 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.15□□□□□ -0.3
SFTPBP07988 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
SFTPBP07988 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
SFTPBP07988 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
SFTPBP07988 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.15□□□□□ -0.3
SFTPBP07988 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.15□□□□□ -0.3
SFTPBP07988 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
SFTPBP07988 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.15□□□□□ -0.31
SFTPBP07988 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.15□□□□□ -0.31
SFTPBP07988 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.31
SFTPBP07988 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
SFTPBP07988 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.14□□□□□ -0.31
SFTPBP07988 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
SFTPBP07988 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
SFTPBP07988 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SFTPBP07988 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
SFTPBP07988 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC13.14□□□□□ -0.31
SFTPBP07988 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
SFTPBP07988 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC13.14□□□□□ -0.31
SFTPBP07988 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
SFTPBP07988 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.14□□□□□ -0.31
SFTPBP07988 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC13.14□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms