Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HLA-DOAP06340 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-DOAP06340 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DOAP06340 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DOAP06340 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.57■□□□□ 0.4
HLA-DOAP06340 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DOAP06340 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-DOAP06340 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-DOAP06340 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DOAP06340 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HLA-DOAP06340 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DOAP06340 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC17.57■□□□□ 0.4
HLA-DOAP06340 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HLA-DOAP06340 PPT1-215ENST00000641471 2368 ntBASIC17.57■□□□□ 0.4
HLA-DOAP06340 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOAP06340 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
HLA-DOAP06340 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-DOAP06340 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOAP06340 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-DOAP06340 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-DOAP06340 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOAP06340 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HLA-DOAP06340 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOAP06340 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOAP06340 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOAP06340 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOAP06340 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOAP06340 KLF2P1-201ENST00000447438 1042 ntBASIC17.56■□□□□ 0.4
HLA-DOAP06340 AC125604.1-201ENST00000496255 707 ntBASIC17.56■□□□□ 0.4
HLA-DOAP06340 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOAP06340 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC17.56■□□□□ 0.4
HLA-DOAP06340 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOAP06340 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-DOAP06340 SNORD3B-2-202ENST00000571722 791 ntBASIC17.56■□□□□ 0.4
HLA-DOAP06340 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC17.56■□□□□ 0.4
HLA-DOAP06340 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOAP06340 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC17.56■□□□□ 0.4
HLA-DOAP06340 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-DOAP06340 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-DOAP06340 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-DOAP06340 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOAP06340 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOAP06340 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-DOAP06340 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
HLA-DOAP06340 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HLA-DOAP06340 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOAP06340 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOAP06340 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOAP06340 AC007292.2-201ENST00000593524 1812 ntBASIC17.56■□□□□ 0.4
HLA-DOAP06340 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOAP06340 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC17.56■□□□□ 0.4
HLA-DOAP06340 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
HLA-DOAP06340 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOAP06340 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.56■□□□□ 0.4
HLA-DOAP06340 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOAP06340 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HLA-DOAP06340 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
HLA-DOAP06340 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
HLA-DOAP06340 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
HLA-DOAP06340 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.55■□□□□ 0.4
HLA-DOAP06340 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC17.55■□□□□ 0.4
HLA-DOAP06340 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC17.55■□□□□ 0.4
HLA-DOAP06340 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC17.55■□□□□ 0.4
HLA-DOAP06340 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC17.55■□□□□ 0.4
HLA-DOAP06340 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC17.55■□□□□ 0.4
HLA-DOAP06340 AC005962.1-201ENST00000584100 773 ntBASIC17.55■□□□□ 0.4
HLA-DOAP06340 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HLA-DOAP06340 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HLA-DOAP06340 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 PCDHA3-202ENST00000532566 4594 ntBASIC17.55■□□□□ 0.4
HLA-DOAP06340 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC17.55■□□□□ 0.4
HLA-DOAP06340 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.55■□□□□ 0.4
HLA-DOAP06340 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 CICP6-201ENST00000457191 2729 ntBASIC17.55■□□□□ 0.4
HLA-DOAP06340 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 AL157791.1-201ENST00000553667 1699 ntBASIC17.55■□□□□ 0.4
HLA-DOAP06340 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
HLA-DOAP06340 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms