Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LTAP01374 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LTAP01374 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
LTAP01374 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC11.33□□□□□ -0.59
LTAP01374 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC11.33□□□□□ -0.6
LTAP01374 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
LTAP01374 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 AL356585.2-201ENST00000625078 2396 ntBASIC11.33□□□□□ -0.6
LTAP01374 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC11.33□□□□□ -0.6
LTAP01374 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC11.33□□□□□ -0.6
LTAP01374 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC11.33□□□□□ -0.6
LTAP01374 MTND6P24-201ENST00000440466 518 ntBASIC11.33□□□□□ -0.6
LTAP01374 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC11.33□□□□□ -0.6
LTAP01374 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC11.33□□□□□ -0.6
LTAP01374 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC11.33□□□□□ -0.6
LTAP01374 GATD1-206ENST00000526325 756 ntTSL 5 BASIC11.33□□□□□ -0.6
LTAP01374 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC11.33□□□□□ -0.6
LTAP01374 TSFM-210ENST00000550559 897 ntTSL 5 BASIC11.33□□□□□ -0.6
LTAP01374 AC026150.2-201ENST00000564693 1156 ntBASIC11.33□□□□□ -0.6
LTAP01374 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 AC000095.1-201ENST00000603208 874 ntBASIC11.33□□□□□ -0.6
LTAP01374 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.33□□□□□ -0.6
LTAP01374 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC11.33□□□□□ -0.6
LTAP01374 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC11.33□□□□□ -0.6
LTAP01374 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
LTAP01374 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
LTAP01374 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC11.33□□□□□ -0.6
LTAP01374 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
LTAP01374 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
LTAP01374 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
LTAP01374 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC11.33□□□□□ -0.6
LTAP01374 RN7SL832P-201ENST00000607781 1756 ntBASIC11.33□□□□□ -0.6
LTAP01374 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 CROT-203ENST00000419147 2959 ntTSL 2 BASIC11.33□□□□□ -0.6
LTAP01374 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
LTAP01374 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC11.33□□□□□ -0.6
LTAP01374 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
LTAP01374 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC11.32□□□□□ -0.6
LTAP01374 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LTAP01374 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LTAP01374 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC11.32□□□□□ -0.6
LTAP01374 FUK-202ENST00000378912 3925 ntTSL 2 BASIC11.32□□□□□ -0.6
LTAP01374 CICP16-201ENST00000502609 2813 ntBASIC11.32□□□□□ -0.6
LTAP01374 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LTAP01374 CETP-203ENST00000566128 1733 ntTSL 5 BASIC11.32□□□□□ -0.6
LTAP01374 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC11.32□□□□□ -0.6
LTAP01374 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LTAP01374 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LTAP01374 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LTAP01374 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC11.32□□□□□ -0.6
LTAP01374 AC005562.1-201ENST00000583030 3219 ntBASIC11.32□□□□□ -0.6
LTAP01374 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LTAP01374 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
LTAP01374 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LTAP01374 ZNF259P1-201ENST00000407656 1365 ntBASIC11.32□□□□□ -0.6
LTAP01374 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
LTAP01374 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LTAP01374 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC11.32□□□□□ -0.6
LTAP01374 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LTAP01374 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LTAP01374 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC11.32□□□□□ -0.6
LTAP01374 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LTAP01374 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LTAP01374 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
LTAP01374 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
LTAP01374 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
LTAP01374 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LTAP01374 YBX2P1-201ENST00000394192 760 ntBASIC11.32□□□□□ -0.6
LTAP01374 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
LTAP01374 MED15P5-201ENST00000423150 992 ntBASIC11.32□□□□□ -0.6
LTAP01374 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC11.32□□□□□ -0.6
LTAP01374 KRT18P3-201ENST00000451602 1288 ntBASIC11.32□□□□□ -0.6
LTAP01374 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC11.32□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms