Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 AC005229.1-201ENST00000392885 409 ntBASIC13.39□□□□□ -0.27
TRAF3IP2O43734 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 GRAP-202ENST00000395635 834 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 AL355864.2-201ENST00000447420 863 ntBASIC13.39□□□□□ -0.27
TRAF3IP2O43734 FO681548.1-201ENST00000455617 1132 ntBASIC13.39□□□□□ -0.27
TRAF3IP2O43734 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 RN7SL48P-201ENST00000579283 293 ntBASIC13.39□□□□□ -0.27
TRAF3IP2O43734 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TRAF3IP2O43734 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 COPE-202ENST00000349893 948 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 POM121L8P-201ENST00000417732 1281 ntBASIC13.38□□□□□ -0.27
TRAF3IP2O43734 NME2P1-201ENST00000426182 414 ntBASIC13.38□□□□□ -0.27
TRAF3IP2O43734 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 AC245100.3-201ENST00000441281 285 ntBASIC13.38□□□□□ -0.27
TRAF3IP2O43734 POM121L9P-203ENST00000441984 1285 ntBASIC13.38□□□□□ -0.27
TRAF3IP2O43734 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 SLC25A47P1-201ENST00000531577 414 ntBASIC13.38□□□□□ -0.27
TRAF3IP2O43734 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 AC233724.13-201ENST00000598383 410 ntBASIC13.38□□□□□ -0.27
TRAF3IP2O43734 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 ENPP7P14-201ENST00000621765 1040 ntBASIC13.38□□□□□ -0.27
TRAF3IP2O43734 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRAF3IP2O43734 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
TRAF3IP2O43734 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms