Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNRC18O15417 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNRC18O15417 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNRC18O15417 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNRC18O15417 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC15.57■□□□□ 0.08
TNRC18O15417 AC120498.9-201ENST00000339021 3867 ntBASIC15.57■□□□□ 0.08
TNRC18O15417 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC15.57■□□□□ 0.08
TNRC18O15417 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.57■□□□□ 0.08
TNRC18O15417 PCLAF-202ENST00000380258 911 ntTSL 2 BASIC15.57■□□□□ 0.08
TNRC18O15417 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.57■□□□□ 0.08
TNRC18O15417 RFNG-202ENST00000429557 994 ntTSL 5 BASIC15.57■□□□□ 0.08
TNRC18O15417 CCND3P1-201ENST00000438347 580 ntBASIC15.57■□□□□ 0.08
TNRC18O15417 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC15.57■□□□□ 0.08
TNRC18O15417 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC15.57■□□□□ 0.08
TNRC18O15417 ATP5G1P7-201ENST00000444398 400 ntBASIC15.57■□□□□ 0.08
TNRC18O15417 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC15.57■□□□□ 0.08
TNRC18O15417 AC145285.5-201ENST00000562217 361 ntBASIC15.57■□□□□ 0.08
TNRC18O15417 AC005777.1-201ENST00000588332 187 ntBASIC15.57■□□□□ 0.08
TNRC18O15417 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC15.57■□□□□ 0.08
TNRC18O15417 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC15.57■□□□□ 0.08
TNRC18O15417 AC063977.2-201ENST00000601996 421 ntBASIC15.57■□□□□ 0.08
TNRC18O15417 KF455155.1-201ENST00000604493 303 ntBASIC15.57■□□□□ 0.08
TNRC18O15417 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNRC18O15417 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC15.57■□□□□ 0.08
TNRC18O15417 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TNRC18O15417 PNLIPRP2-201ENST00000579578 1482 ntAPPRIS P5 TSL 2 BASIC15.57■□□□□ 0.08
TNRC18O15417 ECI2-201ENST00000361538 1380 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
TNRC18O15417 SLC36A1-211ENST00000616007 1389 ntTSL 2 BASIC15.57■□□□□ 0.08
TNRC18O15417 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
TNRC18O15417 IL6RP1-201ENST00000417848 1273 ntBASIC15.57■□□□□ 0.08
TNRC18O15417 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC15.57■□□□□ 0.08
TNRC18O15417 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.56■□□□□ 0.08
TNRC18O15417 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC18O15417 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
TNRC18O15417 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC18O15417 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC18O15417 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC18O15417 LINC00544-201ENST00000400540 1031 ntTSL 5 BASIC15.56■□□□□ 0.08
TNRC18O15417 RPSAP6-201ENST00000417882 882 ntBASIC15.56■□□□□ 0.08
TNRC18O15417 AL365500.1-201ENST00000442783 868 ntTSL 3 BASIC15.56■□□□□ 0.08
TNRC18O15417 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC15.56■□□□□ 0.08
TNRC18O15417 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC18O15417 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC15.56■□□□□ 0.08
TNRC18O15417 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC18O15417 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TNRC18O15417 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.56■□□□□ 0.08
TNRC18O15417 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.56■□□□□ 0.08
TNRC18O15417 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC18O15417 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC15.56■□□□□ 0.08
TNRC18O15417 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC18O15417 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC18O15417 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC15.56■□□□□ 0.08
TNRC18O15417 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.56■□□□□ 0.08
TNRC18O15417 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.56■□□□□ 0.08
TNRC18O15417 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC15.56■□□□□ 0.08
TNRC18O15417 KRT19P4-201ENST00000443208 943 ntBASIC15.56■□□□□ 0.08
TNRC18O15417 PARVG-208ENST00000466375 820 ntTSL 2 BASIC15.56■□□□□ 0.08
TNRC18O15417 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC15.56■□□□□ 0.08
TNRC18O15417 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC15.56■□□□□ 0.08
TNRC18O15417 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC18O15417 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.56■□□□□ 0.08
TNRC18O15417 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
TNRC18O15417 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC18O15417 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC18O15417 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC15.56■□□□□ 0.08
TNRC18O15417 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
TNRC18O15417 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC18O15417 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC18O15417 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
TNRC18O15417 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC18O15417 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
TNRC18O15417 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC18O15417 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC15.55■□□□□ 0.08
TNRC18O15417 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
TNRC18O15417 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC18O15417 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC18O15417 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC15.55■□□□□ 0.08
TNRC18O15417 GLIPR2-201ENST00000377959 812 ntTSL 3 BASIC15.55■□□□□ 0.08
TNRC18O15417 RNA5SP420-201ENST00000516997 137 ntBASIC15.55■□□□□ 0.08
TNRC18O15417 AL133467.4-201ENST00000602953 725 ntBASIC15.55■□□□□ 0.08
TNRC18O15417 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC18O15417 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.55■□□□□ 0.08
TNRC18O15417 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC18O15417 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
TNRC18O15417 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.55■□□□□ 0.08
TNRC18O15417 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC18O15417 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC18O15417 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC18O15417 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC18O15417 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC18O15417 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC18O15417 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC18O15417 SUMO1-206ENST00000409368 1187 ntTSL 4 BASIC15.55■□□□□ 0.08
TNRC18O15417 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC15.55■□□□□ 0.08
TNRC18O15417 AL353658.1-201ENST00000436263 789 ntTSL 2 BASIC15.55■□□□□ 0.08
TNRC18O15417 AF186996.6-201ENST00000485294 149 ntBASIC15.55■□□□□ 0.08
TNRC18O15417 AC007622.1-201ENST00000488371 535 ntBASIC15.55■□□□□ 0.08
TNRC18O15417 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
TNRC18O15417 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.55■□□□□ 0.08
TNRC18O15417 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms