Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC10.33□□□□□ -0.76
NDUFA1O15239 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
NDUFA1O15239 RBM39-205ENST00000397370 612 ntTSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 IMP4-203ENST00000409935 958 ntTSL 5 BASIC10.33□□□□□ -0.76
NDUFA1O15239 SYS1-203ENST00000414310 795 ntTSL 3 BASIC10.33□□□□□ -0.76
NDUFA1O15239 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 TMEM198B-204ENST00000484016 896 ntBASIC10.33□□□□□ -0.76
NDUFA1O15239 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC10.33□□□□□ -0.76
NDUFA1O15239 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC10.33□□□□□ -0.76
NDUFA1O15239 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC10.33□□□□□ -0.76
NDUFA1O15239 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC10.33□□□□□ -0.76
NDUFA1O15239 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC10.33□□□□□ -0.76
NDUFA1O15239 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC10.33□□□□□ -0.76
NDUFA1O15239 AC005829.1-201ENST00000570002 483 ntBASIC10.33□□□□□ -0.76
NDUFA1O15239 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
NDUFA1O15239 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 AL035456.1-201ENST00000456064 1369 ntBASIC10.33□□□□□ -0.76
NDUFA1O15239 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 KRT8P24-201ENST00000560290 1559 ntBASIC10.33□□□□□ -0.76
NDUFA1O15239 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 HADH-202ENST00000403312 1752 ntTSL 5 BASIC10.33□□□□□ -0.76
NDUFA1O15239 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC10.33□□□□□ -0.76
NDUFA1O15239 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
NDUFA1O15239 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC10.33□□□□□ -0.76
NDUFA1O15239 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC10.33□□□□□ -0.76
NDUFA1O15239 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
NDUFA1O15239 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 LSS-211ENST00000522411 2523 ntTSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC10.33□□□□□ -0.76
NDUFA1O15239 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC10.33□□□□□ -0.76
NDUFA1O15239 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC10.33□□□□□ -0.76
NDUFA1O15239 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC10.33□□□□□ -0.76
NDUFA1O15239 AC015818.8-201ENST00000587907 1519 ntBASIC10.33□□□□□ -0.76
NDUFA1O15239 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
NDUFA1O15239 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC10.32□□□□□ -0.76
NDUFA1O15239 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC10.32□□□□□ -0.76
NDUFA1O15239 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 AC016397.2-201ENST00000624848 1985 ntBASIC10.32□□□□□ -0.76
NDUFA1O15239 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 ZBTB45P1-201ENST00000452761 1456 ntBASIC10.32□□□□□ -0.76
NDUFA1O15239 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
NDUFA1O15239 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
NDUFA1O15239 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC10.32□□□□□ -0.76
NDUFA1O15239 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
NDUFA1O15239 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC10.32□□□□□ -0.76
NDUFA1O15239 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
NDUFA1O15239 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms