Protein–RNA interactions for Protein: O00221

NFKBIE, NF-kappa-B inhibitor epsilon, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKBIEO00221 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKBIEO00221 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKBIEO00221 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC17.64■□□□□ 0.41
NFKBIEO00221 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
NFKBIEO00221 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NFKBIEO00221 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NFKBIEO00221 KCNK16-204ENST00000437525 981 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKBIEO00221 AC098934.1-203ENST00000442868 1262 ntBASIC17.64■□□□□ 0.41
NFKBIEO00221 SCARNA12-201ENST00000459155 270 ntBASIC17.64■□□□□ 0.41
NFKBIEO00221 RAMP3-203ENST00000496212 543 ntAPPRIS ALT2 TSL 4 BASIC17.64■□□□□ 0.41
NFKBIEO00221 MRPS36-204ENST00000512880 1200 ntTSL 5 BASIC17.64■□□□□ 0.41
NFKBIEO00221 AC011383.1-201ENST00000517474 617 ntTSL 3 BASIC17.64■□□□□ 0.41
NFKBIEO00221 IGHV3OR15-7-201ENST00000558565 359 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NFKBIEO00221 ACSM5-206ENST00000575584 1130 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NFKBIEO00221 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC17.64■□□□□ 0.41
NFKBIEO00221 MRPS36-205ENST00000602380 1200 ntTSL 2 BASIC17.64■□□□□ 0.41
NFKBIEO00221 AC008972.2-201ENST00000606587 494 ntBASIC17.64■□□□□ 0.41
NFKBIEO00221 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC17.64■□□□□ 0.41
NFKBIEO00221 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKBIEO00221 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKBIEO00221 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC17.64■□□□□ 0.41
NFKBIEO00221 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKBIEO00221 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKBIEO00221 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKBIEO00221 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC17.64■□□□□ 0.41
NFKBIEO00221 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
NFKBIEO00221 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKBIEO00221 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKBIEO00221 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKBIEO00221 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NFKBIEO00221 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
NFKBIEO00221 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NFKBIEO00221 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC17.63■□□□□ 0.41
NFKBIEO00221 PHB-210ENST00000511832 1509 ntTSL 2 BASIC17.63■□□□□ 0.41
NFKBIEO00221 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC17.63■□□□□ 0.41
NFKBIEO00221 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC17.63■□□□□ 0.41
NFKBIEO00221 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC17.63■□□□□ 0.41
NFKBIEO00221 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC17.63■□□□□ 0.41
NFKBIEO00221 GH2-203ENST00000449787 753 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
NFKBIEO00221 AC013553.1-201ENST00000560906 267 ntBASIC17.63■□□□□ 0.41
NFKBIEO00221 AC021016.3-201ENST00000608367 477 ntBASIC17.63■□□□□ 0.41
NFKBIEO00221 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 AGGF1P1-201ENST00000509500 2073 ntBASIC17.63■□□□□ 0.41
NFKBIEO00221 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC17.63■□□□□ 0.41
NFKBIEO00221 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.63■□□□□ 0.41
NFKBIEO00221 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
NFKBIEO00221 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC17.63■□□□□ 0.41
NFKBIEO00221 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.63■□□□□ 0.41
NFKBIEO00221 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
NFKBIEO00221 API5-203ENST00000455725 2257 ntTSL 2 BASIC17.63■□□□□ 0.41
NFKBIEO00221 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC17.63■□□□□ 0.41
NFKBIEO00221 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC17.63■□□□□ 0.41
NFKBIEO00221 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
NFKBIEO00221 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC17.62■□□□□ 0.41
NFKBIEO00221 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NFKBIEO00221 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
NFKBIEO00221 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
NFKBIEO00221 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NFKBIEO00221 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NFKBIEO00221 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
NFKBIEO00221 PSMB4-201ENST00000290541 964 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NFKBIEO00221 SAT1-201ENST00000379251 801 ntTSL 2 BASIC17.62■□□□□ 0.41
NFKBIEO00221 SAT1-202ENST00000379253 909 ntTSL 2 BASIC17.62■□□□□ 0.41
NFKBIEO00221 SAT1-203ENST00000379254 868 ntTSL 3 BASIC17.62■□□□□ 0.41
NFKBIEO00221 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NFKBIEO00221 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NFKBIEO00221 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC17.62■□□□□ 0.41
NFKBIEO00221 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC17.62■□□□□ 0.41
NFKBIEO00221 S100A2-205ENST00000487430 752 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
NFKBIEO00221 LINC01485-202ENST00000520324 566 ntTSL 4 BASIC17.62■□□□□ 0.41
NFKBIEO00221 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC17.62■□□□□ 0.41
NFKBIEO00221 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
NFKBIEO00221 NAA40-205ENST00000539656 577 ntTSL 4 BASIC17.62■□□□□ 0.41
NFKBIEO00221 AC012174.1-201ENST00000562349 714 ntTSL 3 BASIC17.62■□□□□ 0.41
NFKBIEO00221 AP001269.2-201ENST00000590055 379 ntTSL 3 BASIC17.62■□□□□ 0.41
NFKBIEO00221 PTPN20CP-201ENST00000614090 920 ntBASIC17.62■□□□□ 0.41
NFKBIEO00221 TP53-221ENST00000615910 1149 ntTSL 5 BASIC17.62■□□□□ 0.41
NFKBIEO00221 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC17.62■□□□□ 0.41
NFKBIEO00221 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms