Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 WASH3P-207ENST00000560956 1394 ntBASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 RN7SKP230-201ENST00000365642 335 ntBASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 DEF8-202ENST00000418391 852 ntTSL 2 BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 RN7SL163P-201ENST00000583100 276 ntBASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 REXO1L2P-201ENST00000425429 2069 ntBASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 AL138725.1-201ENST00000407347 1314 ntBASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
TBC1D3FA6NER0 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 AC004899.1-201ENST00000424687 1714 ntBASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 DPM3-202ENST00000368399 517 ntBASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 CYP46A4P-201ENST00000414953 267 ntBASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 KRTAP19-9P-201ENST00000421795 191 ntBASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 DUX4L46-201ENST00000566845 751 ntBASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 AL445483.1-201ENST00000568695 736 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 BNIP3P13-201ENST00000599968 566 ntBASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 AC091544.8-201ENST00000619490 361 ntBASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 AC022748.3-201ENST00000621828 275 ntBASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 AC004923.1-202ENST00000642106 209 ntBASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 SALL4P5-201ENST00000419001 1760 ntBASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 E2F3P2-201ENST00000447755 1422 ntBASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 MROH4P-201ENST00000431302 1578 ntBASIC14.9□□□□□ -0.02
TBC1D3FA6NER0 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms