Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TK1-203ENST00000588734 1681 ntTSL 2 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 KLF2P4-201ENST00000451959 1225 ntBASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC068587.3-201ENST00000526613 355 ntBASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC124283.3-201ENST00000570869 594 ntBASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 COX11-210ENST00000639671 696 ntBASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AL359258.3-201ENST00000622910 2331 ntBASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
TCRBV4S1A1TA0A5B7 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AL133267.1-201ENST00000398220 340 ntBASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 USP32P1-208ENST00000506594 1164 ntBASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AP001063.1-201ENST00000568332 529 ntBASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 GPX4-206ENST00000588919 803 ntTSL 2 BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC000095.1-201ENST00000603208 874 ntBASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MIR6775-201ENST00000617557 69 ntBASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC12.13□□□□□ -0.47
TCRBV4S1A1TA0A5B7 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 127.8 ms