Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 RHOF-204ENST00000537265 699 ntTSL 2 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 MIR3917-201ENST00000580971 93 ntBASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 KRT18P8-201ENST00000581937 1246 ntBASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 HLA-B-256ENST00000639848 1089 ntBASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 P4HA1-201ENST00000263556 2844 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 P4HA1-204ENST00000394890 2844 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 TMEM9B-202ENST00000525069 1433 ntTSL 2 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 AC134772.2-202ENST00000634384 3585 ntTSL 2 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 BCL2L11-206ENST00000393256 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 PHF20-203ENST00000374012 5922 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 ARHGEF10-203ENST00000398560 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 DPP8-201ENST00000300141 3139 ntAPPRIS ALT1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 ITFG2-201ENST00000228799 2361 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 ZNF25-201ENST00000302609 4139 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 AKNA-203ENST00000312033 3334 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 LYRM9-202ENST00000379103 1685 ntAPPRIS P1 TSL 3 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 HSPA14-202ENST00000437161 1689 ntTSL 2 BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 SHMT2-201ENST00000328923 2537 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
LINC01558Q9Y6Z2 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 ENOX2-201ENST00000338144 4263 ntTSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 AC073439.1-201ENST00000624121 1774 ntBASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 SLC8A3-207ENST00000528359 2840 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 SLC8A3-210ENST00000534137 2837 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 BTBD3-203ENST00000399006 4826 ntAPPRIS ALT1 TSL 5 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 KIAA0368-202ENST00000338205 7078 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 AC091948.1-201ENST00000501695 2033 ntTSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 ZNF555-203ENST00000591539 2270 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 POLR1B-201ENST00000263331 4558 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 DNAJB12-204ENST00000461919 2369 ntTSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 CDC6-201ENST00000209728 4810 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 TMCO4-202ENST00000375127 2403 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 SMARCA2-254ENST00000636903 2471 ntTSL 5 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 KSR1P1-201ENST00000446298 240 ntBASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 KRT16P5-201ENST00000455284 522 ntBASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 AP003733.1-201ENST00000491725 852 ntBASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 CHMP2B-201ENST00000263780 2557 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 LINC02133-202ENST00000569726 2626 ntTSL 2 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
LINC01558Q9Y6Z2 PES1-205ENST00000405677 2708 ntTSL 2 BASIC7.66□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms