Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC2Q9Y5Z7 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC2Q9Y5Z7 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
HCFC2Q9Y5Z7 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC2Q9Y5Z7 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
HCFC2Q9Y5Z7 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
HCFC2Q9Y5Z7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
HCFC2Q9Y5Z7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 AC007292.2-201ENST00000593524 1812 ntBASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 KRT18P9-201ENST00000604826 1300 ntBASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 MIR4435-2HG-204ENST00000419736 777 ntTSL 3 BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 BUD31-205ENST00000456893 512 ntTSL 5 BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 IGHV3-37-201ENST00000518544 340 ntBASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 MIR4522-201ENST00000584932 87 ntBASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 SIGLEC18P-201ENST00000602271 909 ntBASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 REXO1L2P-201ENST00000425429 2069 ntBASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 ING5-213ENST00000636051 4199 ntTSL 5 BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
HCFC2Q9Y5Z7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 AL627422.1-201ENST00000434104 580 ntBASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 DUTP3-201ENST00000450025 415 ntBASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
HCFC2Q9Y5Z7 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms