Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 SPDYE19P-201ENST00000338590 713 ntBASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 MEP1AP4-201ENST00000423244 1087 ntBASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 DUT-210ENST00000559935 569 ntTSL 3 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 AL009178.2-201ENST00000597278 2719 ntBASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
POLR1DQ9Y2S0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 HECTD1-203ENST00000553700 9080 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 PMS2P2-201ENST00000425039 1128 ntBASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 INGX-202ENST00000489074 768 ntBASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 AC104596.2-201ENST00000512793 793 ntBASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 RNA5SP421-201ENST00000516864 134 ntBASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 RFPL4AP1-201ENST00000530883 850 ntBASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 RARRES2P5-201ENST00000564013 466 ntBASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 AC005498.2-205ENST00000593218 784 ntBASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 AL390955.2-201ENST00000603032 514 ntBASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 DISC1-206ENST00000366637 6848 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
POLR1DQ9Y2S0 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC13.49□□□□□ -0.25
POLR1DQ9Y2S0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.49□□□□□ -0.25
POLR1DQ9Y2S0 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
POLR1DQ9Y2S0 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
POLR1DQ9Y2S0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
POLR1DQ9Y2S0 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC13.49□□□□□ -0.25
POLR1DQ9Y2S0 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC13.49□□□□□ -0.25
POLR1DQ9Y2S0 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
POLR1DQ9Y2S0 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
POLR1DQ9Y2S0 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
POLR1DQ9Y2S0 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms