Protein–RNA interactions for Protein: Q9NYD6

HOXC10, Homeobox protein Hox-C10, humanhuman

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC10Q9NYD6 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 RBM8B-201ENST00000555532 525 ntBASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 MIR6727-201ENST00000620702 65 ntBASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
HOXC10Q9NYD6 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.02■□□□□ 0.31
HOXC10Q9NYD6 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC10Q9NYD6 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.02■□□□□ 0.31
HOXC10Q9NYD6 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC10Q9NYD6 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC10Q9NYD6 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC17.02■□□□□ 0.31
HOXC10Q9NYD6 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC10Q9NYD6 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC10Q9NYD6 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC17.02■□□□□ 0.31
HOXC10Q9NYD6 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC10Q9NYD6 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC10Q9NYD6 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC10Q9NYD6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC10Q9NYD6 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.02■□□□□ 0.31
HOXC10Q9NYD6 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
HOXC10Q9NYD6 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 FER1L4-210ENST00000615531 5998 ntBASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 AL627231.1-201ENST00000394467 1125 ntBASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 AC253536.4-201ENST00000440539 267 ntBASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 AC008723.1-201ENST00000506922 207 ntBASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 LY6E-208ENST00000520531 490 ntTSL 2 BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 AC026803.1-201ENST00000569130 274 ntBASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 MIR5572-201ENST00000583188 137 ntBASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 AL157813.1-201ENST00000612996 587 ntBASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 MIR6769A-201ENST00000617340 73 ntBASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 CYP4F23P-201ENST00000593402 1579 ntBASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 FAM90A2P-201ENST00000511144 1395 ntBASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 FAM90A25P-201ENST00000528404 1395 ntBASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
HOXC10Q9NYD6 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC10Q9NYD6 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC10Q9NYD6 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC10Q9NYD6 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC17■□□□□ 0.31
HOXC10Q9NYD6 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC17■□□□□ 0.31
HOXC10Q9NYD6 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC17■□□□□ 0.31
HOXC10Q9NYD6 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC10Q9NYD6 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC10Q9NYD6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC10Q9NYD6 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC10Q9NYD6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC10Q9NYD6 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC17■□□□□ 0.31
HOXC10Q9NYD6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC10Q9NYD6 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC17■□□□□ 0.31
HOXC10Q9NYD6 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC10Q9NYD6 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HOXC10Q9NYD6 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17■□□□□ 0.31
HOXC10Q9NYD6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC10Q9NYD6 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC10Q9NYD6 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
HOXC10Q9NYD6 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17■□□□□ 0.31
HOXC10Q9NYD6 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC10Q9NYD6 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC17■□□□□ 0.31
HOXC10Q9NYD6 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC17■□□□□ 0.31
HOXC10Q9NYD6 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC17■□□□□ 0.31
HOXC10Q9NYD6 HNRNPA1P27-201ENST00000412087 955 ntBASIC17■□□□□ 0.31
HOXC10Q9NYD6 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
HOXC10Q9NYD6 AC026320.2-201ENST00000434379 478 ntBASIC17■□□□□ 0.31
HOXC10Q9NYD6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17■□□□□ 0.31
HOXC10Q9NYD6 PARP8-206ENST00000503665 572 ntTSL 4 BASIC17■□□□□ 0.31
HOXC10Q9NYD6 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17■□□□□ 0.31
HOXC10Q9NYD6 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms