Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 MRPL37P1-201ENST00000592451 1337 ntBASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
BLOC1S4Q9NUP1 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 FAM8A4P-201ENST00000435433 1213 ntBASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 AC073413.1-201ENST00000603927 732 ntBASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 BX088702.1-201ENST00000610784 235 ntBASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 AL035252.4-201ENST00000624174 288 ntBASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 ANKRD30BP2-201ENST00000435744 1610 ntBASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
BLOC1S4Q9NUP1 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 AC005034.1-201ENST00000426657 489 ntBASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 KRT43P-201ENST00000434019 910 ntBASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 RPL7P3-201ENST00000441388 714 ntBASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 ALG3P1-201ENST00000508806 1114 ntBASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 KRT17P8-201ENST00000540749 863 ntBASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 SNX29P1-201ENST00000548357 1007 ntBASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 AL512343.1-201ENST00000605837 169 ntBASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
BLOC1S4Q9NUP1 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC16.6■□□□□ 0.25
BLOC1S4Q9NUP1 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
BLOC1S4Q9NUP1 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
BLOC1S4Q9NUP1 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.6■□□□□ 0.25
BLOC1S4Q9NUP1 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
BLOC1S4Q9NUP1 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.6■□□□□ 0.25
BLOC1S4Q9NUP1 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.6■□□□□ 0.25
BLOC1S4Q9NUP1 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BLOC1S4Q9NUP1 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
BLOC1S4Q9NUP1 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BLOC1S4Q9NUP1 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
BLOC1S4Q9NUP1 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BLOC1S4Q9NUP1 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
BLOC1S4Q9NUP1 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
BLOC1S4Q9NUP1 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms