Protein–RNA interactions for Protein: Q9BRL7

SEC22C, Vesicle-trafficking protein SEC22c, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22CQ9BRL7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 CTBP1-AS-201ENST00000625256 3886 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 IER3-202ENST00000376377 1350 ntBASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 AP002414.3-201ENST00000589352 1468 ntBASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 GALC-201ENST00000261304 3883 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 CDC45-205ENST00000437685 2072 ntTSL 2 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SEC22CQ9BRL7 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 TCAM1P-207ENST00000485295 1537 ntBASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 SELPLG-203ENST00000550948 2256 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 AC073389.1-201ENST00000595595 795 ntBASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 DENND3-221ENST00000523308 2959 ntTSL 2 BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
SEC22CQ9BRL7 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 BEND7-201ENST00000341083 2239 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 AC020910.6-201ENST00000623084 1459 ntBASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 OSBPL9-201ENST00000361556 2721 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 HIST2H3DP1-201ENST00000401004 416 ntBASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.74□□□□□ -0.37
SEC22CQ9BRL7 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms