Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SMOQ99835 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC15.66■□□□□ 0.1
SMOQ99835 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMOQ99835 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMOQ99835 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
SMOQ99835 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC15.66■□□□□ 0.1
SMOQ99835 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.66■□□□□ 0.1
SMOQ99835 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMOQ99835 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC15.66■□□□□ 0.1
SMOQ99835 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.66■□□□□ 0.1
SMOQ99835 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.66■□□□□ 0.1
SMOQ99835 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
SMOQ99835 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMOQ99835 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMOQ99835 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
SMOQ99835 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMOQ99835 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMOQ99835 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC15.65■□□□□ 0.1
SMOQ99835 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMOQ99835 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.65■□□□□ 0.1
SMOQ99835 TSPY26P-202ENST00000565928 3884 ntBASIC15.65■□□□□ 0.1
SMOQ99835 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.65■□□□□ 0.1
SMOQ99835 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
SMOQ99835 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMOQ99835 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.65■□□□□ 0.1
SMOQ99835 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMOQ99835 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
SMOQ99835 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.65■□□□□ 0.1
SMOQ99835 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SMOQ99835 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMOQ99835 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.65■□□□□ 0.1
SMOQ99835 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC15.65■□□□□ 0.1
SMOQ99835 AC104306.2-201ENST00000451877 341 ntBASIC15.65■□□□□ 0.1
SMOQ99835 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC15.65■□□□□ 0.1
SMOQ99835 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.65■□□□□ 0.1
SMOQ99835 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC15.65■□□□□ 0.1
SMOQ99835 FAM8A2P-201ENST00000528813 1142 ntBASIC15.65■□□□□ 0.1
SMOQ99835 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC15.65■□□□□ 0.1
SMOQ99835 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMOQ99835 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.65■□□□□ 0.1
SMOQ99835 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.65■□□□□ 0.1
SMOQ99835 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.65■□□□□ 0.1
SMOQ99835 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC15.65■□□□□ 0.1
SMOQ99835 AC009955.4-201ENST00000597192 544 ntBASIC15.65■□□□□ 0.1
SMOQ99835 KLK11-210ENST00000600362 759 ntTSL 3 BASIC15.65■□□□□ 0.1
SMOQ99835 AL118558.3-201ENST00000607414 1079 ntBASIC15.65■□□□□ 0.1
SMOQ99835 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC15.65■□□□□ 0.1
SMOQ99835 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SMOQ99835 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SMOQ99835 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMOQ99835 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
SMOQ99835 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMOQ99835 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMOQ99835 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SMOQ99835 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMOQ99835 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMOQ99835 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
SMOQ99835 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SMOQ99835 MRPL37P1-201ENST00000592451 1337 ntBASIC15.65■□□□□ 0.1
SMOQ99835 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
SMOQ99835 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.65■□□□□ 0.1
SMOQ99835 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
SMOQ99835 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
SMOQ99835 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.1
SMOQ99835 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.64■□□□□ 0.09
SMOQ99835 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC15.64■□□□□ 0.09
SMOQ99835 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC15.64■□□□□ 0.09
SMOQ99835 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 AL136172.1-201ENST00000598590 1394 ntBASIC15.64■□□□□ 0.09
SMOQ99835 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC15.64■□□□□ 0.09
SMOQ99835 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
SMOQ99835 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 CALCA-201ENST00000331587 843 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SMOQ99835 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC15.64■□□□□ 0.09
SMOQ99835 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.64■□□□□ 0.09
SMOQ99835 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
SMOQ99835 PUDPP3-201ENST00000445368 636 ntBASIC15.64■□□□□ 0.09
SMOQ99835 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC15.64■□□□□ 0.09
SMOQ99835 MUC1-218ENST00000471283 635 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 ZNF767P-206ENST00000513792 565 ntBASIC15.64■□□□□ 0.09
SMOQ99835 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC15.64■□□□□ 0.09
SMOQ99835 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
SMOQ99835 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.64■□□□□ 0.09
SMOQ99835 AL008638.5-201ENST00000623814 1298 ntBASIC15.64■□□□□ 0.09
SMOQ99835 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
SMOQ99835 LINC01672-205ENST00000635092 633 ntTSL 5 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54 ms