Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 TOMM22P5-201ENST00000416399 439 ntBASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 RPL13P2-201ENST00000440687 659 ntBASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 AC074044.1-201ENST00000609673 707 ntBASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NSMCE2Q96MF7 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 MCCD1P2-201ENST00000423228 335 ntBASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 AC004066.1-201ENST00000502488 802 ntBASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 PP7080-204ENST00000510714 601 ntTSL 3 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 C20orf181-201ENST00000623918 480 ntBASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 AL157414.3-201ENST00000624276 1954 ntBASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 INE2-201ENST00000630399 1874 ntBASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.23□□□□□ -0.13
NSMCE2Q96MF7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.22□□□□□ -0.13
NSMCE2Q96MF7 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms