Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.4□□□□□ -0.26
RFT1Q96AA3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.4□□□□□ -0.26
RFT1Q96AA3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
RFT1Q96AA3 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 AC018442.1-201ENST00000421439 2061 ntBASIC13.4□□□□□ -0.26
RFT1Q96AA3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC13.4□□□□□ -0.26
RFT1Q96AA3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
RFT1Q96AA3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
RFT1Q96AA3 TARDBPP1-201ENST00000442013 1203 ntBASIC13.4□□□□□ -0.26
RFT1Q96AA3 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.4□□□□□ -0.26
RFT1Q96AA3 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC13.4□□□□□ -0.26
RFT1Q96AA3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
RFT1Q96AA3 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC13.4□□□□□ -0.26
RFT1Q96AA3 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC13.4□□□□□ -0.26
RFT1Q96AA3 AL133215.2-201ENST00000609242 977 ntBASIC13.4□□□□□ -0.26
RFT1Q96AA3 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.4□□□□□ -0.26
RFT1Q96AA3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.4□□□□□ -0.26
RFT1Q96AA3 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 AC084364.1-201ENST00000551967 1556 ntBASIC13.4□□□□□ -0.26
RFT1Q96AA3 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
RFT1Q96AA3 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC13.4□□□□□ -0.26
RFT1Q96AA3 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.4□□□□□ -0.26
RFT1Q96AA3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.4□□□□□ -0.26
RFT1Q96AA3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.4□□□□□ -0.26
RFT1Q96AA3 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
RFT1Q96AA3 HDAC9-208ENST00000417496 2524 ntTSL 2 BASIC13.4□□□□□ -0.26
RFT1Q96AA3 ARHGAP31-201ENST00000264245 9317 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
RFT1Q96AA3 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.27
RFT1Q96AA3 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.4□□□□□ -0.27
RFT1Q96AA3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.4□□□□□ -0.27
RFT1Q96AA3 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 MIR3687-2-201ENST00000577708 61 ntBASIC13.39□□□□□ -0.27
RFT1Q96AA3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 AC004835.2-201ENST00000603762 682 ntBASIC13.39□□□□□ -0.27
RFT1Q96AA3 MIR3687-1-201ENST00000614492 61 ntBASIC13.39□□□□□ -0.27
RFT1Q96AA3 AC131212.3-201ENST00000624087 4219 ntBASIC13.39□□□□□ -0.27
RFT1Q96AA3 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RFT1Q96AA3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.39□□□□□ -0.27
RFT1Q96AA3 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms