Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SCAMP4Q969E2 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
SCAMP4Q969E2 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 GPI-205ENST00000586425 1799 ntTSL 5 BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 AC007969.1-201ENST00000433675 447 ntBASIC14.89□□□□□ -0.03
SCAMP4Q969E2 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 RPL13AP20-201ENST00000459725 609 ntBASIC14.89□□□□□ -0.03
SCAMP4Q969E2 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 AC006058.4-201ENST00000624016 1670 ntBASIC14.89□□□□□ -0.03
SCAMP4Q969E2 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
SCAMP4Q969E2 LINC01101-201ENST00000622953 1884 ntBASIC14.89□□□□□ -0.03
SCAMP4Q969E2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 RN7SKP175-201ENST00000408472 289 ntBASIC14.88□□□□□ -0.03
SCAMP4Q969E2 AC004945.1-201ENST00000416738 983 ntBASIC14.88□□□□□ -0.03
SCAMP4Q969E2 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 RN7SL560P-201ENST00000577943 264 ntBASIC14.88□□□□□ -0.03
SCAMP4Q969E2 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 LINC02228-204ENST00000642115 2962 ntBASIC14.88□□□□□ -0.03
SCAMP4Q969E2 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
SCAMP4Q969E2 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
SCAMP4Q969E2 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.87□□□□□ -0.03
SCAMP4Q969E2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms