Protein–RNA interactions for Protein: Q8NEZ2

VPS37A, Vacuolar protein sorting-associated protein 37A, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37AQ8NEZ2 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 POM121L4P-202ENST00000427789 1891 ntBASIC14.4□□□□□ -0.1
VPS37AQ8NEZ2 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.11
VPS37AQ8NEZ2 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 AC009477.1-201ENST00000452936 217 ntBASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 SRD5A3P1-201ENST00000603021 949 ntBASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 AL138799.1-201ENST00000448213 1675 ntBASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 AC093525.8-201ENST00000624099 1342 ntBASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.39□□□□□ -0.11
VPS37AQ8NEZ2 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS37AQ8NEZ2 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.38□□□□□ -0.11
VPS37AQ8NEZ2 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VPS37AQ8NEZ2 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
VPS37AQ8NEZ2 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS37AQ8NEZ2 AL157414.3-201ENST00000624276 1954 ntBASIC14.38□□□□□ -0.11
VPS37AQ8NEZ2 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS37AQ8NEZ2 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VPS37AQ8NEZ2 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS37AQ8NEZ2 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
VPS37AQ8NEZ2 AL158070.2-201ENST00000623713 1621 ntBASIC14.38□□□□□ -0.11
VPS37AQ8NEZ2 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS37AQ8NEZ2 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
VPS37AQ8NEZ2 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms