Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC33Q8N5R6 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC33Q8N5R6 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC33Q8N5R6 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC33Q8N5R6 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC33Q8N5R6 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC33Q8N5R6 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC33Q8N5R6 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC33Q8N5R6 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC33Q8N5R6 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC33Q8N5R6 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC33Q8N5R6 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC33Q8N5R6 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC33Q8N5R6 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.83■□□□□ 0.12
CCDC33Q8N5R6 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCDC33Q8N5R6 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 AC079316.1-201ENST00000548397 411 ntBASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 AC093813.1-201ENST00000605066 256 ntBASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 AC244093.1-201ENST00000610837 814 ntBASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 AC020907.1-201ENST00000616460 1350 ntBASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 INTS4P1-203ENST00000641008 3683 ntBASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCDC33Q8N5R6 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 GHSR-202ENST00000427970 912 ntBASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 PFN1P12-201ENST00000455938 534 ntBASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 AC022137.2-201ENST00000503482 481 ntBASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 GNRHR2-203ENST00000581100 1187 ntBASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 REXO1L5P-201ENST00000622260 2098 ntBASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCDC33Q8N5R6 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCDC33Q8N5R6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms