Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 INE2-201ENST00000630399 1874 ntBASIC17.65■□□□□ 0.42
RAB11FIP4Q86YS3 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB11FIP4Q86YS3 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RAB11FIP4Q86YS3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
RAB11FIP4Q86YS3 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 SNX18-202ENST00000343017 3140 ntBASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 AC112492.5-201ENST00000421897 457 ntBASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 FAM197Y7-201ENST00000432892 766 ntBASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 AC115284.1-201ENST00000488257 547 ntTSL 4 BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 AC015936.2-201ENST00000593177 259 ntBASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 AC023908.3-201ENST00000564211 3047 ntBASIC17.64■□□□□ 0.41
RAB11FIP4Q86YS3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RAB11FIP4Q86YS3 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms