Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 AC018665.1-201ENST00000622927 1362 ntBASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 KLF2P2-201ENST00000416807 1039 ntBASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 CTBP2P3-201ENST00000585629 1255 ntBASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 AP005019.2-201ENST00000615104 511 ntBASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 AC140479.7-201ENST00000636301 2332 ntBASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
HIST2H3AQ71DI3 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 AC236430.1-201ENST00000402231 743 ntBASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 PIN1P1-201ENST00000412108 996 ntBASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 OARD1-208ENST00000469104 704 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 CLUHP6-201ENST00000580789 941 ntBASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 MTHFR-210ENST00000641407 2387 ntBASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.24□□□□□ -0.29
HIST2H3AQ71DI3 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms