Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF43Q68DV7 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.81■□□□□ 0.12
RNF43Q68DV7 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
RNF43Q68DV7 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC15.81■□□□□ 0.12
RNF43Q68DV7 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
RNF43Q68DV7 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 GPAA1P2-201ENST00000417923 928 ntBASIC15.8■□□□□ 0.12
RNF43Q68DV7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 AP001582.1-201ENST00000525856 295 ntBASIC15.8■□□□□ 0.12
RNF43Q68DV7 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 AC010328.2-201ENST00000597698 1111 ntBASIC15.8■□□□□ 0.12
RNF43Q68DV7 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 BX539320.1-201ENST00000623759 877 ntBASIC15.8■□□□□ 0.12
RNF43Q68DV7 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 TAF6-205ENST00000437822 2318 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 CICP14-201ENST00000629111 2732 ntBASIC15.8■□□□□ 0.12
RNF43Q68DV7 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
RNF43Q68DV7 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC15.8■□□□□ 0.12
RNF43Q68DV7 AL138709.1-201ENST00000614840 1693 ntBASIC15.79■□□□□ 0.12
RNF43Q68DV7 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 AC006504.5-208ENST00000588784 2401 ntBASIC15.79■□□□□ 0.12
RNF43Q68DV7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 AC007787.1-201ENST00000588095 1583 ntBASIC15.79■□□□□ 0.12
RNF43Q68DV7 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
RNF43Q68DV7 GZMB-202ENST00000382540 816 ntTSL 5 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 MPV17-206ENST00000402722 827 ntTSL 3 BASIC15.79■□□□□ 0.12
RNF43Q68DV7 ACTBP8-201ENST00000403258 1108 ntBASIC15.79■□□□□ 0.12
RNF43Q68DV7 NUS1P3-201ENST00000423502 862 ntBASIC15.79■□□□□ 0.12
RNF43Q68DV7 YBX1P6-201ENST00000442962 1002 ntBASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms