Protein–RNA interactions for Protein: Q5VT40

FAM78B, Protein FAM78B, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78BQ5VT40 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 AC079140.1-201ENST00000508039 487 ntBASIC12.03□□□□□ -0.48
FAM78BQ5VT40 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 KRT8P48-201ENST00000515599 1220 ntBASIC12.03□□□□□ -0.48
FAM78BQ5VT40 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 AC243562.1-201ENST00000560672 389 ntBASIC12.03□□□□□ -0.48
FAM78BQ5VT40 CMC2-214ENST00000565925 640 ntTSL 5 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 AP000842.3-202ENST00000569238 1080 ntBASIC12.03□□□□□ -0.48
FAM78BQ5VT40 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 AL671883.3-201ENST00000603274 991 ntBASIC12.03□□□□□ -0.48
FAM78BQ5VT40 SERF2-217ENST00000630046 862 ntTSL 5 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 AC152010.1-201ENST00000415779 2006 ntBASIC12.03□□□□□ -0.48
FAM78BQ5VT40 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
FAM78BQ5VT40 BRPF1-205ENST00000433861 4304 ntTSL 2 BASIC12.02□□□□□ -0.48
FAM78BQ5VT40 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
FAM78BQ5VT40 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.48
FAM78BQ5VT40 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
FAM78BQ5VT40 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
FAM78BQ5VT40 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
FAM78BQ5VT40 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
FAM78BQ5VT40 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
FAM78BQ5VT40 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
FAM78BQ5VT40 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
FAM78BQ5VT40 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
FAM78BQ5VT40 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.02□□□□□ -0.48
FAM78BQ5VT40 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC12.02□□□□□ -0.48
FAM78BQ5VT40 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
FAM78BQ5VT40 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
FAM78BQ5VT40 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
FAM78BQ5VT40 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
FAM78BQ5VT40 CR383656.2-201ENST00000548656 2254 ntBASIC12.02□□□□□ -0.49
FAM78BQ5VT40 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 ADH5P3-201ENST00000433842 1137 ntBASIC12.02□□□□□ -0.49
FAM78BQ5VT40 DNAJB3-201ENST00000446806 729 ntBASIC12.02□□□□□ -0.49
FAM78BQ5VT40 CEND1P1-201ENST00000451006 455 ntBASIC12.02□□□□□ -0.49
FAM78BQ5VT40 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 ALG1L5P-201ENST00000482043 771 ntBASIC12.02□□□□□ -0.49
FAM78BQ5VT40 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 RNF34-208ENST00000555076 593 ntTSL 3 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 INO80E-210ENST00000567705 880 ntTSL 3 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 AC005829.1-201ENST00000570002 483 ntBASIC12.02□□□□□ -0.49
FAM78BQ5VT40 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
FAM78BQ5VT40 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.02□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms