Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHRFAM7AQ494W8 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
CHRFAM7AQ494W8 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
CHRFAM7AQ494W8 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
CHRFAM7AQ494W8 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.27□□□□□ -0.28
CHRFAM7AQ494W8 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.27□□□□□ -0.28
CHRFAM7AQ494W8 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 AJ011931.1-201ENST00000618749 2492 ntBASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 SNX29P1-201ENST00000548357 1007 ntBASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 RRP7BP-205ENST00000566851 833 ntBASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 GPR182-203ENST00000622922 591 ntBASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
CHRFAM7AQ494W8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 INTS4P1-203ENST00000641008 3683 ntBASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 KRT8P12-202ENST00000472924 1397 ntBASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 FADS2-205ENST00000517839 469 ntTSL 3 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 AC061975.2-201ENST00000581722 295 ntBASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 TMEM261P1-201ENST00000604899 340 ntBASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 WFDC1-204ENST00000613603 549 ntBASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.26□□□□□ -0.29
CHRFAM7AQ494W8 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.25□□□□□ -0.29
CHRFAM7AQ494W8 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHRFAM7AQ494W8 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHRFAM7AQ494W8 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC13.25□□□□□ -0.29
CHRFAM7AQ494W8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CHRFAM7AQ494W8 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHRFAM7AQ494W8 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC13.25□□□□□ -0.29
CHRFAM7AQ494W8 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms