Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 SURF4-203ENST00000371991 715 ntTSL 3 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 RCL1-204ENST00000381750 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 SOX2-OT-208ENST00000477928 902 ntTSL 2 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 AC114947.1-202ENST00000514136 344 ntBASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 AC010632.2-201ENST00000588369 1224 ntBASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 RPS5-204ENST00000598098 536 ntTSL 2 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 CMC2-224ENST00000630396 481 ntTSL 5 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 AC021305.1-201ENST00000520656 1514 ntBASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.4□□□□□ -0.1
RSPO4Q2I0M5 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 AC006058.4-201ENST00000624016 1670 ntBASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 AC063952.3-201ENST00000467756 308 ntBASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 HERC2P11-201ENST00000562845 725 ntBASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 AC100756.2-201ENST00000569537 736 ntBASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 AC023389.1-201ENST00000577846 576 ntTSL 4 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 MIR3188-201ENST00000583494 85 ntBASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.39□□□□□ -0.11
RSPO4Q2I0M5 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
RSPO4Q2I0M5 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms