Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.84□□□□□ -0.03
CDKL1Q00532 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CDKL1Q00532 AL157414.3-201ENST00000624276 1954 ntBASIC14.84□□□□□ -0.03
CDKL1Q00532 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL1Q00532 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL1Q00532 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL1Q00532 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL1Q00532 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL1Q00532 AC007541.1-201ENST00000570282 1469 ntBASIC14.83□□□□□ -0.03
CDKL1Q00532 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.83□□□□□ -0.03
CDKL1Q00532 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL1Q00532 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
CDKL1Q00532 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CDKL1Q00532 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL1Q00532 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL1Q00532 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL1Q00532 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL1Q00532 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.83□□□□□ -0.04
CDKL1Q00532 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL1Q00532 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL1Q00532 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL1Q00532 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL1Q00532 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC14.83□□□□□ -0.04
CDKL1Q00532 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.83□□□□□ -0.04
CDKL1Q00532 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC14.83□□□□□ -0.04
CDKL1Q00532 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.04
CDKL1Q00532 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL1Q00532 AL139094.1-201ENST00000405549 1188 ntBASIC14.83□□□□□ -0.04
CDKL1Q00532 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.83□□□□□ -0.04
CDKL1Q00532 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL1Q00532 SOCS2P1-201ENST00000417727 557 ntBASIC14.83□□□□□ -0.04
CDKL1Q00532 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.83□□□□□ -0.04
CDKL1Q00532 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.83□□□□□ -0.04
CDKL1Q00532 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC14.83□□□□□ -0.04
CDKL1Q00532 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.83□□□□□ -0.04
CDKL1Q00532 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.83□□□□□ -0.04
CDKL1Q00532 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC14.83□□□□□ -0.04
CDKL1Q00532 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.83□□□□□ -0.04
CDKL1Q00532 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC14.83□□□□□ -0.04
CDKL1Q00532 AC008761.3-201ENST00000624803 892 ntBASIC14.83□□□□□ -0.04
CDKL1Q00532 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.83□□□□□ -0.04
CDKL1Q00532 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.04
CDKL1Q00532 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL1Q00532 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CDKL1Q00532 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL1Q00532 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
CDKL1Q00532 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL1Q00532 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL1Q00532 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL1Q00532 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL1Q00532 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL1Q00532 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CDKL1Q00532 KRT8P14-201ENST00000414254 1442 ntBASIC14.83□□□□□ -0.04
CDKL1Q00532 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.82□□□□□ -0.04
CDKL1Q00532 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.82□□□□□ -0.04
CDKL1Q00532 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.82□□□□□ -0.04
CDKL1Q00532 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.82□□□□□ -0.04
CDKL1Q00532 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 INTS4P1-203ENST00000641008 3683 ntBASIC14.82□□□□□ -0.04
CDKL1Q00532 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
CDKL1Q00532 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CDKL1Q00532 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDKL1Q00532 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.82□□□□□ -0.04
CDKL1Q00532 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CDKL1Q00532 DUX4L47-201ENST00000566374 394 ntBASIC14.82□□□□□ -0.04
CDKL1Q00532 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.82□□□□□ -0.04
CDKL1Q00532 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.82□□□□□ -0.04
CDKL1Q00532 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.82□□□□□ -0.04
CDKL1Q00532 LINC02560-201ENST00000596379 459 ntBASIC14.82□□□□□ -0.04
CDKL1Q00532 AC133539.2-201ENST00000604757 467 ntBASIC14.82□□□□□ -0.04
CDKL1Q00532 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CDKL1Q00532 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.82□□□□□ -0.04
CDKL1Q00532 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CDKL1Q00532 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms